Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 AC083798.1-201ENST00000472671 131 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 RNU6-180P-201ENST00000516697 61 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 AC055872.1-201ENST00000570978 278 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 MIR4528-201ENST00000577763 90 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 AP001180.6-201ENST00000584918 159 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 AL133255.1-201ENST00000606374 441 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 MIR4788-201ENST00000639104 80 ntBASIC-0.55□□□□□ -2.5
LYSMD1Q96S90 SNORA75.4-201ENST00000391278 119 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 SNORD12B-201ENST00000410433 91 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 RNU6-256P-201ENST00000516747 97 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 MIR4639-201ENST00000584938 69 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 AC018638.8-201ENST00000588755 281 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 AC027449.1-201ENST00000608890 407 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 AC091931.1-201ENST00000623488 728 ntBASIC-0.56□□□□□ -2.5
LYSMD1Q96S90 RNU6-874P-201ENST00000362390 105 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 SNORA24-201ENST00000384096 131 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 SNORA72.6-201ENST00000384520 129 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 MIR563-201ENST00000385080 79 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 RNU4-30P-201ENST00000410245 143 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 RNU6-602P-201ENST00000411155 105 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 FCF1P9-201ENST00000412546 282 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 MTND4LP11-201ENST00000422184 280 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 AL138752.1-201ENST00000452964 351 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 RNU7-25P-201ENST00000516544 62 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 MIR5589-201ENST00000579442 60 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 POLR3GP1-201ENST00000594073 261 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 SNORA70.25-201ENST00000612741 95 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 Z97988.1-201ENST00000637697 135 ntBASIC-0.57□□□□□ -2.5
LYSMD1Q96S90 RNU6-961P-201ENST00000363893 105 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 SNORD14C-201ENST00000365382 88 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 RNU6-291P-201ENST00000384720 107 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 AL603910.2-201ENST00000407268 136 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 RNU6-648P-201ENST00000410190 107 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 MIR1912-201ENST00000410389 80 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 RN7SKP142-201ENST00000411236 328 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 USP9YP30-201ENST00000430729 455 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 RNU6-273P-201ENST00000516937 96 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 MIR548AD-201ENST00000584780 82 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 AP001330.5-201ENST00000607176 411 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 AC006441.5-201ENST00000612680 209 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 AL162726.3-218ENST00000636401 95 ntBASIC-0.58□□□□□ -2.5
LYSMD1Q96S90 RNA5SP98-201ENST00000363158 137 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 RNU6-926P-201ENST00000384075 107 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 RNU6-535P-201ENST00000384722 107 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 MIR196A2-201ENST00000385189 110 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 MIR1278-201ENST00000408753 81 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 RPL21P38-201ENST00000418090 167 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 AL365203.2-201ENST00000423444 196 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 RNU6-155P-201ENST00000516347 100 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 RNU6-835P-201ENST00000516974 104 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 MIR3672-201ENST00000584290 82 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 MIR8055-201ENST00000610739 97 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 AC006157.1-201ENST00000611750 366 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 MIR6082-201ENST00000613604 109 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.59□□□□□ -2.5
LYSMD1Q96S90 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 RNU6-708P-201ENST00000384217 107 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 RNU6-480P-201ENST00000384332 107 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 MTND3P3-201ENST00000505004 126 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 MTND5P34-201ENST00000568888 325 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 MIR3925-201ENST00000584674 77 ntBASIC-0.6□□□□□ -2.51
LYSMD1Q96S90 MIR101-1-201ENST00000362265 75 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-34-201ENST00000362441 82 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-12-201ENST00000362583 82 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-29-201ENST00000362834 82 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-9-201ENST00000362912 82 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-21-201ENST00000362963 81 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-14-201ENST00000363090 81 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-13-201ENST00000363358 82 ntBASIC-0.61□□□□□ -2.51
LYSMD1Q96S90 SNORD115-41-201ENST00000363608 82 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms