Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 Y_RNA.117-201ENST00000363294 101 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 RNU6-740P-201ENST00000364734 105 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 SNORD72-201ENST00000390994 80 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.31□□□□□ -2.2
NR1H4Q96RI1 MTCO2P24-201ENST00000515611 426 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 RN7SKP179-201ENST00000516126 217 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 RNU7-43P-201ENST00000516554 64 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 RNU6-548P-201ENST00000517083 115 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 MIR3124-201ENST00000582636 67 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 AL049861.1-201ENST00000603130 150 ntBASIC1.31□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.3□□□□□ -2.2
NR1H4Q96RI1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.3□□□□□ -2.2
NR1H4Q96RI1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.3□□□□□ -2.2
NR1H4Q96RI1 RNU6-126P-201ENST00000516685 103 ntBASIC1.3□□□□□ -2.2
NR1H4Q96RI1 SNORD53B-201ENST00000577887 78 ntBASIC1.3□□□□□ -2.2
NR1H4Q96RI1 MIR4662B-201ENST00000579498 81 ntBASIC1.3□□□□□ -2.2
NR1H4Q96RI1 Pinc.1-201ENST00000616452 154 ntBASIC1.3□□□□□ -2.2
NR1H4Q96RI1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.3□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.82-201ENST00000363000 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.92-201ENST00000363043 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 RNU6-268P-201ENST00000364174 107 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.235-201ENST00000364412 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.306-201ENST00000365015 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.312-201ENST00000365089 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.322-201ENST00000365151 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.396-201ENST00000383949 103 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 RNU6-472P-201ENST00000384299 107 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 MIR548H3-201ENST00000408771 118 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 MTCYBP9-201ENST00000431021 303 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AL591806.2-201ENST00000433122 173 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AC245047.7-201ENST00000440265 293 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.650-201ENST00000459002 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 SNORD123-201ENST00000459473 70 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AC108210.2-201ENST00000503681 201 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.29□□□□□ -2.2
NR1H4Q96RI1 RNU7-149P-201ENST00000516739 59 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.777-201ENST00000516982 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 SNORA70.22-201ENST00000517160 124 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.771-201ENST00000598668 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AL021707.8-201ENST00000609428 183 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AC006441.5-201ENST00000612680 209 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 AC015726.2-201ENST00000620112 122 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.789-201ENST00000622480 102 ntBASIC1.29□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.24-201ENST00000362508 103 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.54-201ENST00000362766 105 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 MIR517C-201ENST00000385103 95 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 SNRPGP13-201ENST00000442212 177 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 MIR4764-201ENST00000580680 88 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 MIR4524B-201ENST00000581569 115 ntBASIC1.28□□□□□ -2.2
NR1H4Q96RI1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NR1H4Q96RI1 SNORA1.2-201ENST00000365189 134 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 MIR764-201ENST00000390811 85 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 MIR1323-201ENST00000408090 73 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 CYCSP49-201ENST00000420810 319 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.27□□□□□ -2.21
NR1H4Q96RI1 SNRPGP14-201ENST00000435400 219 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 SNORD2.1-201ENST00000458762 69 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 COX6CP14-201ENST00000469580 174 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 RNU6-830P-201ENST00000516353 107 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 AL022345.2-201ENST00000606307 135 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 BX284668.6-201ENST00000606899 438 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 AL096861.1-201ENST00000610899 123 ntBASIC1.27□□□□□ -2.21
NR1H4Q96RI1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.133-201ENST00000363428 110 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 RNA5SP48-201ENST00000363969 126 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 RNU4-10P-201ENST00000364383 140 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 RNA5SP190-201ENST00000365222 118 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 SNORA67.6-201ENST00000391093 99 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 AL603910.2-201ENST00000407268 136 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 snoU13.23-201ENST00000458863 104 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 AC100767.1-201ENST00000528178 123 ntBASIC1.26□□□□□ -2.21
NR1H4Q96RI1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.26□□□□□ -2.21
NR1H4Q96RI1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
NR1H4Q96RI1 MIR626-201ENST00000385032 94 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
NR1H4Q96RI1 SNORA26.9-201ENST00000391322 122 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 RNU2-38P-201ENST00000410856 79 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 AL354695.1-201ENST00000427935 228 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 AC245047.8-201ENST00000456455 284 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 RN7SKP164-201ENST00000516138 266 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 SNORD77.4-201ENST00000516158 81 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.25□□□□□ -2.21
NR1H4Q96RI1 AC012433.1-201ENST00000588916 398 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 AL353621.2-201ENST00000605340 133 ntBASIC1.25□□□□□ -2.21
NR1H4Q96RI1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.25□□□□□ -2.21
NR1H4Q96RI1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.25□□□□□ -2.21
NR1H4Q96RI1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms