Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 U8.17-201ENST00000391292 132 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 MTCO2P33-201ENST00000402100 465 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 AC244098.3-201ENST00000424803 96 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 RNU6-437P-201ENST00000459408 95 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 SNORD19B-201ENST00000459623 84 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 SNORA40.14-201ENST00000516543 86 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 AC022709.1-201ENST00000615967 87 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 AC015726.2-201ENST00000620112 122 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 AL606534.2-204ENST00000635008 178 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 RNU1-133P-201ENST00000364867 167 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 RNU1-115P-201ENST00000365329 160 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 Y_RNA.439-201ENST00000384119 94 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 SNORD63-201ENST00000384262 68 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 RNU1-119P-201ENST00000391122 165 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 MIR1278-201ENST00000408753 81 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 SNORA36B-201ENST00000410438 131 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS35Q96QK1 RPL23AP91-201ENST00000569211 455 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 AC011195.1-201ENST00000578177 177 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 MIR4300-201ENST00000581016 96 ntBASIC0.55□□□□□ -2.32
VPS35Q96QK1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VPS35Q96QK1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNU6-1048P-201ENST00000364054 107 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 Y_RNA.252-201ENST00000364556 101 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNU6-1283P-201ENST00000365314 105 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 SNORD72-201ENST00000390994 80 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNU7-141P-201ENST00000459304 62 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 U8.20-201ENST00000459445 131 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNA5SP121-201ENST00000516537 101 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 Y_RNA.713-201ENST00000517013 96 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 RNU7-181P-201ENST00000517234 74 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 SNORD58B-201ENST00000607313 66 ntBASIC0.54□□□□□ -2.32
VPS35Q96QK1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VPS35Q96QK1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
VPS35Q96QK1 RNU4-80P-201ENST00000363200 141 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 SNORA72.1-201ENST00000363485 129 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 Y_RNA.143-201ENST00000363520 106 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 RNU6-674P-201ENST00000363831 107 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 RNY3-201ENST00000365484 102 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 Y_RNA.383-201ENST00000383855 97 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 SNORA72.4-201ENST00000384174 132 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 Y_RNA.526-201ENST00000384572 110 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 POLR2KP2-201ENST00000438155 177 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 AC010655.3-201ENST00000478818 450 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 FGF7P4-201ENST00000509595 295 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 MIR548AO-201ENST00000579992 96 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 AC005357.1-201ENST00000588399 301 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 MIR6734-201ENST00000621166 68 ntBASIC0.53□□□□□ -2.32
VPS35Q96QK1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.53□□□□□ -2.33
VPS35Q96QK1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.52□□□□□ -2.33
VPS35Q96QK1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
VPS35Q96QK1 MIR1-1-201ENST00000362147 71 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 SNORA1.2-201ENST00000365189 134 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 AL603910.2-201ENST00000407268 136 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 RNU2-14P-201ENST00000411053 191 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS35Q96QK1 SNORD11-201ENST00000459124 84 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 RNU6-976P-201ENST00000516086 111 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 RNU6-1007P-201ENST00000516586 107 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.52□□□□□ -2.33
VPS35Q96QK1 MIR4791-201ENST00000607666 84 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 AC006441.5-201ENST00000612680 209 ntBASIC0.52□□□□□ -2.33
VPS35Q96QK1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS35Q96QK1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.52□□□□□ -2.33
VPS35Q96QK1 Y_RNA.5-201ENST00000362334 102 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 Y_RNA.242-201ENST00000364473 110 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 Y_RNA.471-201ENST00000384312 102 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 RNA5SP222-201ENST00000411039 105 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 AC104695.3-201ENST00000604052 296 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 AC122108.2-201ENST00000611946 526 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 MIR6513-201ENST00000621188 64 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 MTND1P7-201ENST00000632801 297 ntBASIC0.51□□□□□ -2.33
VPS35Q96QK1 MIR377-201ENST00000362145 69 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 Y_RNA.80-201ENST00000362996 102 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 RNU4-50P-201ENST00000364361 141 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 Y_RNA.286-201ENST00000364813 102 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 Y_RNA.485-201ENST00000384395 102 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 MT-TN-201ENST00000387400 73 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 RNU6-1248P-201ENST00000391096 64 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 SCARNA8-201ENST00000515924 131 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 RNU4-57P-201ENST00000515980 135 ntBASIC0.5□□□□□ -2.33
VPS35Q96QK1 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 376.9 ms