Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-261P-201ENST00000459506 102 ntBASIC-0.82□□□□□ -2.54
AP1S3Q96PC3 AC011352.1-201ENST00000512300 793 ntBASIC-0.82□□□□□ -2.54
AP1S3Q96PC3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.82□□□□□ -2.54
AP1S3Q96PC3 AC087685.1-201ENST00000587507 141 ntBASIC-0.82□□□□□ -2.54
AP1S3Q96PC3 AC010205.1-201ENST00000616668 449 ntBASIC-0.82□□□□□ -2.54
AP1S3Q96PC3 ZNF299P-201ENST00000406845 1804 ntBASIC-0.82□□□□□ -2.54
AP1S3Q96PC3 RNU6-874P-201ENST00000362390 105 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU4-84P-201ENST00000364200 139 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 SNORD37.1-201ENST00000390968 65 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 MIR876-201ENST00000401147 81 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 USMG5P1-201ENST00000425964 177 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 MTND2P14-201ENST00000482139 351 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 AC010424.1-201ENST00000506336 297 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU6-475P-201ENST00000516073 104 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU6-311P-201ENST00000516224 102 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU6-966P-201ENST00000516479 104 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU7-25P-201ENST00000516544 62 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNA5SP480-201ENST00000516840 109 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 MIR4491-201ENST00000581087 68 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 MIR4436A-201ENST00000585278 85 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 AP001330.5-201ENST00000607176 411 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 AC109347.2-201ENST00000610220 349 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 AP001282.2-201ENST00000616149 309 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 MIR6759-201ENST00000638110 65 ntBASIC-0.83□□□□□ -2.54
AP1S3Q96PC3 RNU6-879P-201ENST00000364328 108 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 MIR1278-201ENST00000408753 81 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 MIR378D2-201ENST00000580636 98 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 MIR4263-201ENST00000584745 83 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 AC019193.3-201ENST00000609144 554 ntBASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.84□□□□□ -2.54
AP1S3Q96PC3 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 RNU6-128P-201ENST00000383976 107 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 SNORA1-201ENST00000384107 130 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 SNORA8.3-201ENST00000384679 139 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 MIR514A2-201ENST00000385131 88 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 MIR514A3-201ENST00000385132 88 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 RNU6-192P-201ENST00000391253 100 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 RNA5SP285-201ENST00000516619 119 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 RNU6-759P-201ENST00000516740 103 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 RNU6-765P-201ENST00000516916 99 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 AC060780.3-201ENST00000589464 80 ntBASIC-0.85□□□□□ -2.55
AP1S3Q96PC3 FGF7P2-201ENST00000332473 296 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 MIR101-2-201ENST00000362195 79 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 RNA5SP257-201ENST00000363023 116 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 RNU6-961P-201ENST00000363893 105 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 RNU6-306P-201ENST00000384617 107 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 AC107297.1-201ENST00000459991 176 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 RPL7P42-201ENST00000481005 679 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 AC096720.1-201ENST00000604441 183 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 AC124303.1-201ENST00000605703 360 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.86□□□□□ -2.55
AP1S3Q96PC3 SNORD115-34-201ENST00000362441 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-12-201ENST00000362583 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-29-201ENST00000362834 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-9-201ENST00000362912 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-21-201ENST00000362963 81 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-14-201ENST00000363090 81 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-13-201ENST00000363358 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-41-201ENST00000363608 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-11-201ENST00000363616 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-5-201ENST00000363633 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-39-201ENST00000363694 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-4-201ENST00000363810 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-674P-201ENST00000363831 107 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-16-201ENST00000363887 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-6-201ENST00000363942 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-42-201ENST00000364273 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU4-75P-201ENST00000364621 146 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-15-201ENST00000364809 81 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-1-201ENST00000364961 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-26-201ENST00000365067 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-10-201ENST00000365073 81 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-43-201ENST00000365503 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-597P-201ENST00000365620 102 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 SNORD115-36-201ENST00000365629 82 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 MIR190B-201ENST00000401119 79 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-938P-201ENST00000411285 103 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU7-125P-201ENST00000458760 62 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-408P-201ENST00000515910 100 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 RNU6-436P-201ENST00000516171 114 ntBASIC-0.87□□□□□ -2.55
AP1S3Q96PC3 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms