| HOOK2 | Q96ED9 | RNU4-71P-201 | ENST00000516258 | 113 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | MIR4643-201 | ENST00000577473 | 78 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | MIR4422-201 | ENST00000581938 | 83 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | MIR8063-201 | ENST00000621930 | 81 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | KLRA1P-203 | ENST00000535939 | 2353 nt | TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | Y_RNA.188-201 | ENST00000363952 | 111 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | Y_RNA.262-201 | ENST00000364641 | 102 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | RNA5SP259-201 | ENST00000365541 | 109 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | AC005840.1-201 | ENST00000498412 | 377 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | MTND1P19-201 | ENST00000511780 | 315 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | AP000942.4-201 | ENST00000604811 | 241 nt | BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | SEMG2-201 | ENST00000372769 | 2051 nt | APPRIS P1 TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | MIR302D-201 | ENST00000362275 | 68 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | Y_RNA.336-201 | ENST00000365307 | 109 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | RNU6-338P-201 | ENST00000383888 | 105 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | RNU6-383P-201 | ENST00000410864 | 94 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | SNORD11-201 | ENST00000459124 | 84 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | SNORD45.4-201 | ENST00000516629 | 73 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | SUMO2P16-201 | ENST00000519475 | 264 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| HOOK2 | Q96ED9 | Y_RNA.60-201 | ENST00000362831 | 98 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.65-201 | ENST00000362846 | 100 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORD14E-201 | ENST00000364009 | 85 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.539-201 | ENST00000384635 | 107 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR802-201 | ENST00000390235 | 94 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU7-95P-201 | ENST00000459222 | 64 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC079140.2-201 | ENST00000506193 | 142 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC114811.1-201 | ENST00000507207 | 168 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | CARD18-203 | ENST00000532895 | 422 nt | TSL 2 BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AL365265.1-201 | ENST00000621045 | 234 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC068733.3-201 | ENST00000632757 | 269 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.76-201 | ENST00000362931 | 109 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORD1A-201 | ENST00000364968 | 72 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR452-201 | ENST00000385020 | 85 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU1-78P-201 | ENST00000391248 | 165 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR1278-201 | ENST00000408753 | 81 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RN7SKP51-201 | ENST00000410781 | 304 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RPL31P63-201 | ENST00000422565 | 375 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | PIGPP3-201 | ENST00000425307 | 415 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.680-201 | ENST00000516441 | 93 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | CBX3P4-201 | ENST00000538909 | 354 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR4778-201 | ENST00000577635 | 80 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC068700.1-201 | ENST00000565862 | 3754 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-1065P-201 | ENST00000384513 | 106 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | LINC01073-201 | ENST00000441659 | 149 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC245517.4-201 | ENST00000448601 | 281 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | NDUFA4P2-201 | ENST00000489989 | 244 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-126P-201 | ENST00000516685 | 103 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-1271P-201 | ENST00000517049 | 105 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-1116P-201 | ENST00000517269 | 99 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC008507.4-201 | ENST00000585464 | 127 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MBNL3-212 | ENST00000538204 | 11294 nt | TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.24-201 | ENST00000362508 | 103 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNY1-201 | ENST00000364228 | 113 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.269-201 | ENST00000364685 | 89 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORD50B-201 | ENST00000364995 | 70 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNY4P28-201 | ENST00000365281 | 93 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-442P-201 | ENST00000383968 | 104 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR499A-201 | ENST00000384903 | 122 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR517C-201 | ENST00000385103 | 95 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORD116-28-201 | ENST00000516123 | 91 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR8070-201 | ENST00000616510 | 88 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | KTN1-205 | ENST00000395314 | 4618 nt | APPRIS P4 TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | HFM1-201 | ENST00000370425 | 4931 nt | APPRIS P1 TSL 1 (best) BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORA67.6-201 | ENST00000391093 | 99 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC093850.1-201 | ENST00000454121 | 251 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-111P-201 | ENST00000517179 | 105 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC024614.2-201 | ENST00000577584 | 372 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR4662B-201 | ENST00000579498 | 81 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC011921.3-201 | ENST00000605540 | 361 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | TTC28-AS1_2.1-201 | ENST00000611117 | 157 nt | BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | KIAA1107-201 | ENST00000370378 | 4622 nt | TSL 5 BASIC | 1.92 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-653P-201 | ENST00000363074 | 106 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU4-10P-201 | ENST00000364383 | 140 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNU4-17P-201 | ENST00000365598 | 141 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | Y_RNA.476-201 | ENST00000384347 | 108 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AC027119.1-201 | ENST00000440877 | 241 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | RNA5SP445-201 | ENST00000515889 | 115 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | LINC02277-202 | ENST00000556472 | 453 nt | TSL 3 BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | MIR3937-201 | ENST00000580135 | 106 nt | BASIC | 1.91 | □□□□□ -2.1 | | |
| HOOK2 | Q96ED9 | AL513534.2-201 | ENST00000603836 | 250 nt | BASIC | 1.91 | □□□□□ -2.1 | | |