Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 snoU2_19.2-201ENST00000363024 80 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU6-770P-201ENST00000363929 105 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU6-1048P-201ENST00000364054 107 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU6-290P-201ENST00000365212 101 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 MIR516B2-201ENST00000385190 85 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 MIR136-201ENST00000385207 82 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU6-985P-201ENST00000410182 104 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 MTCO1P5-201ENST00000433573 344 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 AC015922.2-201ENST00000435593 184 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU7-141P-201ENST00000459304 62 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 AC117454.1-201ENST00000491120 168 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 SNORA40.15-201ENST00000516884 107 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 AC090821.2-201ENST00000523552 176 ntBASIC1.03□□□□□ -2.24
SNRNP40Q96DI7 RNU6-674P-201ENST00000363831 107 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.210-201ENST00000364161 110 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.569-201ENST00000384749 103 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 MIR15B-201ENST00000385045 98 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 SNORA26.5-201ENST00000391215 123 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 RNU2-14P-201ENST00000411053 191 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 SNRPGP10-201ENST00000432323 225 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 HMGN2P32-201ENST00000444648 269 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 RPL23AP54-201ENST00000495129 419 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 RNU6-1143P-201ENST00000516125 104 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 RNU6-764P-201ENST00000516396 105 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 SNORD45.4-201ENST00000516629 73 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 RNU6-1153P-201ENST00000516760 105 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SNRNP40Q96DI7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 RNU6-639P-201ENST00000384074 107 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.541-201ENST00000384640 113 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 MIR802-201ENST00000390235 94 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 RPL21P38-201ENST00000418090 167 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 MTND4LP30-201ENST00000454092 297 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 SNORD79.1-201ENST00000516069 84 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 AC087685.1-201ENST00000587507 141 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 AC005357.1-201ENST00000588399 301 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 JPX_2.1-201ENST00000614161 69 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 AC134026.1-201ENST00000623249 2239 ntBASIC1.01□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.19-201ENST00000362462 99 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.26-201ENST00000362539 101 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.152-201ENST00000363578 100 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 SNORD50B-201ENST00000364995 70 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 RNU6-806P-201ENST00000365147 105 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 RNU6-326P-201ENST00000365480 107 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 SNORA36B-201ENST00000410438 131 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 RNU6-437P-201ENST00000459408 95 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 AC098869.1-201ENST00000481627 292 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1□□□□□ -2.25
SNRNP40Q96DI7 RN7SKP179-201ENST00000516126 217 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1□□□□□ -2.25
SNRNP40Q96DI7 AL096861.1-201ENST00000610899 123 ntBASIC1□□□□□ -2.25
SNRNP40Q96DI7 AC008163.1-202ENST00000636004 2889 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 RNU6-1209P-201ENST00000363655 107 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 RNA5SP325-201ENST00000363756 130 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 MIR215-201ENST00000384858 110 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 MIR520C-201ENST00000385005 87 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 RNU6-763P-201ENST00000390865 106 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 MIR1278-201ENST00000408753 81 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AC002429.1-201ENST00000437672 148 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AL731563.1-201ENST00000442202 214 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AC245047.8-201ENST00000456455 284 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 MRPS35P2-201ENST00000508242 191 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 RNY3P15-201ENST00000516297 97 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 RNU2-31P-201ENST00000516954 155 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AC090142.3-201ENST00000519012 385 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AP003733.2-201ENST00000529409 171 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 AC007742.2-201ENST00000618226 398 ntBASIC0.99□□□□□ -2.25
SNRNP40Q96DI7 RNU6-899P-201ENST00000363947 107 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 SNORD14E-201ENST00000364009 85 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 SNORD114-24-201ENST00000365029 72 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 MIR19B1-201ENST00000384829 87 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.637-201ENST00000459424 114 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 NDUFA4P2-201ENST00000489989 244 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 RNA5SP436-201ENST00000516020 115 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 SNORA18.7-201ENST00000516910 131 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 MIR2681-201ENST00000581814 105 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SNRNP40Q96DI7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms