Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 Y_RNA.8-201ENST00000362353 102 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 SNORD50B-201ENST00000364995 70 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 RNU6-449P-201ENST00000383914 107 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 RNU6-442P-201ENST00000383968 104 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 RNU6-484P-201ENST00000384016 107 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 HMGN2P32-201ENST00000444648 269 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 CYCTP-201ENST00000504253 315 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 MIR378D2-201ENST00000580636 98 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 AC027279.3-201ENST00000625055 122 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 MTND1P7-201ENST00000632801 297 ntBASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 RNU6-804P-201ENST00000384286 107 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.580-201ENST00000391004 95 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 MIR548M-201ENST00000408260 86 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 RNU7-12P-201ENST00000516030 62 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 SNORD116-25-201ENST00000516517 92 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 RNU6-504P-201ENST00000516568 104 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 RNA5SP168-201ENST00000516642 112 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 AC120024.3-201ENST00000603167 156 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 MIR7843-201ENST00000622274 79 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
CTHRC1Q96CG8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.84□□□□□ -2.11
CTHRC1Q96CG8 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
CTHRC1Q96CG8 SNORD72-201ENST00000390994 80 ntBASIC1.84□□□□□ -2.11
CTHRC1Q96CG8 RNU7-121P-201ENST00000516604 62 ntBASIC1.84□□□□□ -2.11
CTHRC1Q96CG8 AC021753.1-201ENST00000635724 168 ntBASIC1.84□□□□□ -2.11
CTHRC1Q96CG8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CTHRC1Q96CG8 RNU6-424P-201ENST00000384367 105 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 MIR504-201ENST00000385065 83 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 U8.16-201ENST00000391279 133 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 AL603908.1-201ENST00000406098 201 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 CALM2P4-201ENST00000430810 426 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 AC114811.1-201ENST00000507207 168 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 AC021506.2-201ENST00000612354 169 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 AL513423.1-201ENST00000621695 132 ntBASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
CTHRC1Q96CG8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 RNU6-833P-201ENST00000363486 107 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.398-201ENST00000383952 99 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 SNORD116-18-201ENST00000383961 92 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 MIR891A-201ENST00000401237 79 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 MIR1289-2-201ENST00000408360 111 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 PGBD4P5-201ENST00000445958 426 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 MIR4524B-201ENST00000581569 115 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 DNAJC19P2-201ENST00000593340 302 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 AC097639.2-201ENST00000603159 172 ntBASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CTHRC1Q96CG8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 MIRLET7C-201ENST00000362160 84 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 RNU6-414P-201ENST00000363705 104 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 SNORA25.7-201ENST00000364375 127 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 RNU6-746P-201ENST00000384112 109 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 SNORD37.2-201ENST00000391075 66 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 RNU6-255P-201ENST00000516957 105 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 MIR3646-201ENST00000578301 84 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 MIR6844-201ENST00000637122 62 ntBASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.170-201ENST00000363746 110 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 RNU6-151P-201ENST00000364158 107 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 SNORD24-201ENST00000383884 75 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 Y_RNA.393-201ENST00000383936 102 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 SNORD38C-201ENST00000384381 69 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 RNA5SP233-201ENST00000459153 113 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 MIR4769-201ENST00000584126 77 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 AL365434.2-201ENST00000607979 234 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 AC006441.5-201ENST00000612680 209 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 SNORD3E-202ENST00000627253 216 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 ICE2P2-201ENST00000483823 2787 ntBASIC1.8□□□□□ -2.12
CTHRC1Q96CG8 RNU6-199P-201ENST00000362954 107 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 RNU6-1130P-201ENST00000365434 107 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 RNU6-597P-201ENST00000365620 102 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 MIR660-201ENST00000385235 97 ntBASIC1.79□□□□□ -2.12
CTHRC1Q96CG8 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms