Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNY3P16-201ENST00000516338 101 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 AC087685.1-201ENST00000587507 141 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 Z83818.1-201ENST00000603584 150 ntBASIC1.94□□□□□ -2.1
TRIM43Q96BQ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 MIR802-201ENST00000390235 94 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 SNORA12.1-201ENST00000390873 148 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 MIR1267-201ENST00000408723 78 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 AC004965.1-201ENST00000413033 213 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 CALM2P4-201ENST00000430810 426 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 RNU6-794P-201ENST00000517261 64 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 MIR4762-201ENST00000585261 75 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 MIR6504-201ENST00000613520 61 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 AL513423.1-201ENST00000621695 132 ntBASIC1.93□□□□□ -2.1
TRIM43Q96BQ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 RNU6-1020P-201ENST00000363684 107 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 RNU6-392P-201ENST00000364926 101 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 MIR616-201ENST00000385293 97 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 RNU6-381P-201ENST00000391259 108 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 AC108059.2-201ENST00000434626 151 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 JTBP1-201ENST00000441314 247 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 PGBD4P5-201ENST00000445958 426 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 AL138752.1-201ENST00000452964 351 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 CYCTP-201ENST00000504253 315 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 RNU6-138P-201ENST00000515952 107 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 RNA5SP168-201ENST00000516642 112 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 SNORA44.1-201ENST00000517031 108 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 AL049861.1-201ENST00000603130 150 ntBASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 RNU6-103P-201ENST00000363686 107 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 RNU6-424P-201ENST00000384367 105 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 RNU6-163P-201ENST00000384396 106 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 U8.16-201ENST00000391279 133 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AC245047.8-201ENST00000456455 284 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 SNORD11-201ENST00000459124 84 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AC099513.1-201ENST00000490423 301 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 Y_RNA.700-201ENST00000516806 100 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AC120024.3-201ENST00000603167 156 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AL645939.4-201ENST00000604495 135 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AL021707.8-201ENST00000609428 183 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 AL391903.3-201ENST00000612158 163 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 MIR8074-201ENST00000615081 81 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 SNORD3E-202ENST00000627253 216 ntBASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.91□□□□□ -2.1
TRIM43Q96BQ3 MIR424-201ENST00000362227 98 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 uc_338.4-201ENST00000616635 176 ntBASIC1.9□□□□□ -2.11
TRIM43Q96BQ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 SNORD14E-201ENST00000364009 85 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 RNU6-203P-201ENST00000384038 104 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 MIR7-2-201ENST00000384970 110 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 AC027279.3-201ENST00000625055 122 ntBASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM43Q96BQ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.29-201ENST00000362570 113 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 RNY3P5-201ENST00000384127 102 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 RNU4-70P-201ENST00000384579 139 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 MIR891A-201ENST00000401237 79 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 PIGPP3-201ENST00000425307 415 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 MTND5P15-201ENST00000434246 349 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 HMGN2P32-201ENST00000444648 269 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 RNU6-717P-201ENST00000459076 104 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 SNORD45.4-201ENST00000516629 73 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 MIR4308-201ENST00000580634 81 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 MIR3668-201ENST00000582138 75 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 RNU2-4P-201ENST00000606190 192 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
TRIM43Q96BQ3 MIRLET7C-201ENST00000362160 84 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 Y_RNA.121-201ENST00000363309 113 ntBASIC1.87□□□□□ -2.11
TRIM43Q96BQ3 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms