Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AL442128.1-201ENST00000615151 90 ntBASIC2.58□□□□□ -2
SH3RF3Q8TEJ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 RNU6-1152P-201ENST00000384576 107 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 HMGN2P3-201ENST00000433603 273 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 HMGN2P5-201ENST00000436882 273 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 RN7SKP12-201ENST00000516275 143 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 MIR4662B-201ENST00000579498 81 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 MIR4753-201ENST00000585119 83 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 MIR376A2-201ENST00000636782 80 ntBASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SH3RF3Q8TEJ3 RNU6-944P-201ENST00000364023 107 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 SNORD61-201ENST00000384252 73 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 MIR548A2-201ENST00000384956 97 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 MIR590-201ENST00000385008 97 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 MIR29B2-201ENST00000385055 81 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 SNORA19.1-201ENST00000410656 129 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 Y_RNA.685-201ENST00000516532 108 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 RNU6-113P-201ENST00000516653 101 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 AC011604.1-201ENST00000545978 196 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 AL137067.1-201ENST00000615933 120 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 MIR6132-201ENST00000622083 109 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 MIR219B-201ENST00000637023 88 ntBASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
SH3RF3Q8TEJ3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 SNORA63.5-201ENST00000363548 123 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 SNORD31B-201ENST00000364977 69 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 RNU6-418P-201ENST00000384035 107 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 RNU1-52P-201ENST00000384190 164 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 MT-TI-201ENST00000387365 69 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 AC097462.1-201ENST00000514125 324 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.55□□□□□ -2
SH3RF3Q8TEJ3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 RNU6-234P-201ENST00000365229 104 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 Y_RNA.544-201ENST00000384650 113 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 SNORD77.3-201ENST00000391113 65 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 RPS27P22-201ENST00000478056 241 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 MRPS17P9-201ENST00000511924 393 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 RNU6-504P-201ENST00000516568 104 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 RNU6-126P-201ENST00000516685 103 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 U2.20-201ENST00000613956 192 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 AC009487.4-201ENST00000624969 3585 ntBASIC2.54□□□□□ -2
SH3RF3Q8TEJ3 RNU1-72P-201ENST00000362976 153 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 RNU6-888P-201ENST00000363010 101 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 Y_RNA.362-201ENST00000365518 110 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 MIR764-201ENST00000390811 85 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 AL117342.1-201ENST00000404861 406 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 EDDM3CP-201ENST00000415977 425 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 AC023449.1-201ENST00000454464 154 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 RNU6-498P-201ENST00000459468 107 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 RNU6-948P-201ENST00000516374 107 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 RNA5SP395-201ENST00000516567 118 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 U6.73-201ENST00000619194 103 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
SH3RF3Q8TEJ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.49-201ENST00000362714 112 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 Y_RNA.198-201ENST00000364013 98 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 RNA5SP247-201ENST00000411181 105 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 MTATP8P2-201ENST00000435212 202 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-970P-201ENST00000516312 107 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-830P-201ENST00000516353 107 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-158P-201ENST00000517104 100 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 MIR5009-201ENST00000578736 100 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 AC025521.1-201ENST00000621624 286 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SH3RF3Q8TEJ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 RNY1P10-201ENST00000363268 113 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 SNORD24-201ENST00000383884 75 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 RNU6-1113P-201ENST00000384348 107 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 AL161788.1-201ENST00000441805 169 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 AC011753.1-201ENST00000451001 220 ntBASIC2.51□□□□□ -2.01
SH3RF3Q8TEJ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms