Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNU6-13P-201ENST00000384248 107 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 RNU6-12P-201ENST00000384604 107 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 RNU6-41P-201ENST00000384741 107 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 SNORD12C-201ENST00000386307 89 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 RNU7-26P-201ENST00000458980 63 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 AC005786.1-201ENST00000588553 154 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 MIR4679-1-201ENST00000637619 75 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
NUP43Q8NFH3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
NUP43Q8NFH3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP43Q8NFH3 RNU1-58P-201ENST00000362413 163 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 RNU6-440P-201ENST00000390882 105 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 SNORA11.4-201ENST00000408823 129 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 RNU6-237P-201ENST00000515985 71 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 RNY4P20-201ENST00000516678 93 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 GTF3AP2-201ENST00000557014 266 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 AC002984.1-201ENST00000591692 448 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 MIR8054-201ENST00000620877 86 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 AL035470.1-201ENST00000622571 220 ntBASIC2.48□□□□□ -2.01
NUP43Q8NFH3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP43Q8NFH3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP43Q8NFH3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NUP43Q8NFH3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
NUP43Q8NFH3 MIRLET7C-201ENST00000362160 84 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 SNORA38-201ENST00000363946 132 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.198-201ENST00000364013 98 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 RNU6-690P-201ENST00000365242 106 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 BX510359.4-201ENST00000423750 193 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 AC105272.1-201ENST00000438604 198 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 STAG3L5P-204ENST00000443759 179 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 HMGN2P32-201ENST00000444648 269 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 SNORA31.10-201ENST00000516482 106 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 AC084364.2-201ENST00000546924 395 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 AC015726.2-201ENST00000620112 122 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 AC009831.4-201ENST00000620744 325 ntBASIC2.47□□□□□ -2.01
NUP43Q8NFH3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.47□□□□□ -2.01
NUP43Q8NFH3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NUP43Q8NFH3 RNU1-148P-201ENST00000384472 162 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 MIR29C-201ENST00000385231 88 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 RPS29P24-201ENST00000486345 171 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 AC114811.1-201ENST00000507207 168 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.694-201ENST00000516677 117 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 AP003484.1-201ENST00000530974 250 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 AC069114.2-201ENST00000604699 304 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NUP43Q8NFH3 AL442644.1-201ENST00000454390 3105 ntBASIC2.46□□□□□ -2.02
NUP43Q8NFH3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUP43Q8NFH3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NUP43Q8NFH3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 RNY1P6-201ENST00000384193 109 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 MT-TI-201ENST00000387365 69 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 MIR1261-201ENST00000408659 82 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 RNA5SP184-201ENST00000411071 108 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 AC087499.4-201ENST00000448505 178 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP43Q8NFH3 UBL5P3-201ENST00000475112 231 ntBASIC2.45□□□□□ -2.02
NUP43Q8NFH3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NUP43Q8NFH3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.163-201ENST00000363702 113 ntBASIC2.44□□□□□ -2.02
NUP43Q8NFH3 RNU1-133P-201ENST00000364867 167 ntBASIC2.44□□□□□ -2.02
NUP43Q8NFH3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP43Q8NFH3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP43Q8NFH3 RN7SKP132-201ENST00000516001 208 ntBASIC2.44□□□□□ -2.02
NUP43Q8NFH3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP43Q8NFH3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NUP43Q8NFH3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP43Q8NFH3 ICE2P2-201ENST00000483823 2787 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 RNU4-82P-201ENST00000362443 140 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 RNU6-766P-201ENST00000362478 107 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.298-201ENST00000364960 107 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.328-201ENST00000365208 113 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 HSPE1P9-201ENST00000440046 311 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.677-201ENST00000516401 85 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 SNORA18.7-201ENST00000516910 131 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 RNU7-70P-201ENST00000516941 66 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 MIR5094-201ENST00000578766 85 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 MIR5582-201ENST00000579697 68 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 AC021443.1-201ENST00000604478 211 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 SNORA28-201ENST00000606769 126 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 AC091932.4-201ENST00000623386 200 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 AC027279.3-201ENST00000625055 122 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
NUP43Q8NFH3 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.323-201ENST00000365157 109 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.351-201ENST00000365436 96 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.362-201ENST00000365518 110 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 RNU6-163P-201ENST00000384396 106 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 MIR597-201ENST00000384968 97 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 RNA5SP508-201ENST00000411327 119 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP43Q8NFH3 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 RNU7-123P-201ENST00000515911 60 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 RNU6-830P-201ENST00000516353 107 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 RNU6-537P-201ENST00000517277 103 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms