Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MIR891A-201ENST00000401237 79 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.25□□□□□ -2.05
HIPK4Q8NE63 CYCTP-201ENST00000504253 315 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 RNU6-1234P-201ENST00000516877 103 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 MIR548AI-201ENST00000579940 88 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 AL033523.1-201ENST00000605153 153 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 AC011603.4-201ENST00000611325 277 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HIPK4Q8NE63 AP006437.1-201ENST00000641440 3685 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HIPK4Q8NE63 RNU6-424P-201ENST00000384367 105 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 SNORA22C-201ENST00000384614 134 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 RNU6-950P-201ENST00000384651 107 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 SNORD77.3-201ENST00000391113 65 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 U8.16-201ENST00000391279 133 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 AL034345.1-201ENST00000407768 123 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 RNA5SP100-201ENST00000410903 110 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 RNA5SP59-201ENST00000410922 110 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 AF228730.3-201ENST00000436691 102 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 RNU7-25P-201ENST00000516544 62 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.24□□□□□ -2.05
HIPK4Q8NE63 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.24□□□□□ -2.05
HIPK4Q8NE63 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.24□□□□□ -2.05
HIPK4Q8NE63 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AC062016.1-201ENST00000355719 319 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.261-201ENST00000364631 102 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.294-201ENST00000364916 102 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 SNORD116-14-201ENST00000383894 92 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 SNORD116-17-201ENST00000383929 92 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 RNU6-163P-201ENST00000384396 106 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 SNORD116-15-201ENST00000384445 92 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 SNORD116-19-201ENST00000384729 92 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 RNU6-1154P-201ENST00000391001 104 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AL359511.1-201ENST00000402970 211 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AC008267.6-201ENST00000441664 139 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 HMGN2P32-201ENST00000444648 269 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 RNU6-313P-201ENST00000516317 112 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 U1.36-201ENST00000620684 176 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AC027279.3-201ENST00000625055 122 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 MIR376A2-201ENST00000636782 80 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
HIPK4Q8NE63 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HIPK4Q8NE63 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HIPK4Q8NE63 RNU6-508P-201ENST00000363231 103 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.127-201ENST00000363386 109 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 RNU6-80P-201ENST00000384195 107 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.547-201ENST00000384654 119 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.22□□□□□ -2.05
HIPK4Q8NE63 RNA5SP168-201ENST00000516642 112 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 AC078899.2-201ENST00000595282 212 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 SCARNA15.3-201ENST00000626315 122 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 SCARNA4.1-201ENST00000628597 123 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 AL442644.1-201ENST00000454390 3105 ntBASIC2.22□□□□□ -2.05
HIPK4Q8NE63 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.21□□□□□ -2.05
HIPK4Q8NE63 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 Y_RNA.280-201ENST00000364765 112 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 MIR634-201ENST00000385208 97 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 AL603914.1-201ENST00000401964 204 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 AC099513.1-201ENST00000490423 301 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.21□□□□□ -2.06
HIPK4Q8NE63 RNU6-1333P-201ENST00000516162 93 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 RNA5SP236-201ENST00000516169 116 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
HIPK4Q8NE63 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIPK4Q8NE63 MTND5P32-201ENST00000560711 1802 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 snoU13.27-201ENST00000459278 104 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 Y_RNA.690-201ENST00000516603 95 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 MIR514B-201ENST00000516774 80 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 RNA5SP481-201ENST00000516814 122 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 MIR3121-201ENST00000579680 77 ntBASIC2.2□□□□□ -2.06
HIPK4Q8NE63 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.2□□□□□ -2.06
HIPK4Q8NE63 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.2□□□□□ -2.06
HIPK4Q8NE63 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HIPK4Q8NE63 RNU6-833P-201ENST00000363486 107 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 SNORD115-28-201ENST00000363931 81 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 RNU6-309P-201ENST00000364573 106 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 RNU6-938P-201ENST00000411285 103 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.19□□□□□ -2.06
HIPK4Q8NE63 RNU7-34P-201ENST00000459394 64 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 RNU4-57P-201ENST00000515980 135 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 Y_RNA.692-201ENST00000516627 105 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 SCARNA15-202ENST00000516881 127 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 SNORA31.17-201ENST00000516953 127 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 MIR4709-201ENST00000577272 72 ntBASIC2.19□□□□□ -2.06
HIPK4Q8NE63 MIR5197-201ENST00000583721 112 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms