Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 AC073413.2-201ENST00000604332 360 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.24□□□□□ -2.05
SIMC1Q8NDZ2 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 MIR520G-201ENST00000385064 90 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 AL603914.1-201ENST00000401964 204 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.630-201ENST00000411370 108 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 Z98742.3-201ENST00000418637 326 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 AL356320.1-201ENST00000429616 163 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 NDUFA4P2-201ENST00000489989 244 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 JPX_2.1-201ENST00000614161 69 ntBASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIMC1Q8NDZ2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.66-201ENST00000362862 102 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 SNORD114-6-201ENST00000364393 72 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-309P-201ENST00000364573 106 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 SNORD18B-201ENST00000365659 72 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 MIR597-201ENST00000384968 97 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 RNA5SP212-201ENST00000391223 107 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AC011406.1-201ENST00000512440 370 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 RNU7-99P-201ENST00000516271 62 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 RNU6-589P-201ENST00000516485 107 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.690-201ENST00000516603 95 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 RNU7-128P-201ENST00000517247 62 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AC007751.1-201ENST00000529260 376 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AC133485.4-201ENST00000561835 220 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AC138907.4-201ENST00000570107 226 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 MIR4662B-201ENST00000579498 81 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AC091178.2-201ENST00000584401 117 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AC108081.1-201ENST00000604358 221 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 U6.95-201ENST00000636931 70 ntBASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.22□□□□□ -2.05
SIMC1Q8NDZ2 Y_RNA.52-201ENST00000362760 96 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 AL591806.2-201ENST00000433122 173 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 SNORA18.4-201ENST00000516440 124 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-1061P-201ENST00000516530 99 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-126P-201ENST00000516685 103 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-365P-201ENST00000517113 106 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 AC103810.6-201ENST00000606708 136 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 AC067747.1-201ENST00000608026 250 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 MIR1291-201ENST00000627649 87 ntBASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SIMC1Q8NDZ2 MIR624-201ENST00000385217 97 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 SNORA48.1-201ENST00000390879 135 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP467-201ENST00000391274 118 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 Y_RNA.617-201ENST00000410920 90 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP127-201ENST00000411051 133 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RPL23AP6-201ENST00000446637 472 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 AC233266.1-201ENST00000454518 96 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 HMGN1P7-201ENST00000491722 313 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 AC234781.5-201ENST00000508429 271 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 MRPS17P9-201ENST00000511924 393 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RNU5E-3P-201ENST00000515913 68 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 SNORD33.1-201ENST00000516213 88 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-548P-201ENST00000517083 115 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 AL365205.2-201ENST00000594586 68 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 AC242852.1-201ENST00000612151 96 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 AC244015.1-201ENST00000622301 99 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SIMC1Q8NDZ2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 SNORD58C-201ENST00000365223 64 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 SNORA22-201ENST00000383907 134 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 SNORA1-201ENST00000384107 130 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 MIR891A-201ENST00000401237 79 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 SNRPGP10-201ENST00000432323 225 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 RPS26P45-201ENST00000471748 340 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 CYCTP-201ENST00000504253 315 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-504P-201ENST00000516568 104 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 AL353149.1-201ENST00000610667 244 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 MIR338-201ENST00000636369 67 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 U6.108-201ENST00000637764 58 ntBASIC2.19□□□□□ -2.06
SIMC1Q8NDZ2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms