Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AL365265.1-201ENST00000621045 234 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 RNU1-78P-201ENST00000391248 165 ntBASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 MIR1278-201ENST00000408753 81 ntBASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 RN7SKP51-201ENST00000410781 304 ntBASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 PIGPP3-201ENST00000425307 415 ntBASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-322P-201ENST00000516010 103 ntBASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-1271P-201ENST00000517049 105 ntBASIC2.03□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.76-201ENST00000362931 109 ntBASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-442P-201ENST00000383968 104 ntBASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 AC245517.4-201ENST00000448601 281 ntBASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 AL365434.2-201ENST00000607979 234 ntBASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 uc_338.4-201ENST00000616635 176 ntBASIC2.02□□□□□ -2.09
PRPF38AQ8NAV1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.24-201ENST00000362508 103 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 SNORA2.2-201ENST00000365473 135 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.476-201ENST00000384347 108 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.539-201ENST00000384635 107 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 MIR15B-201ENST00000385045 98 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 SNX2P2-201ENST00000424553 323 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 AC027119.1-201ENST00000440877 241 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 RNA5SP445-201ENST00000515889 115 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 SNORD116-28-201ENST00000516123 91 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 MIR4662B-201ENST00000579498 81 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 AC008507.4-201ENST00000585464 127 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 MIR502-201ENST00000606349 86 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 AL021707.8-201ENST00000609428 183 ntBASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-457P-201ENST00000363999 107 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.269-201ENST00000364685 89 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 SNORD50B-201ENST00000364995 70 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 RNU4-17P-201ENST00000365598 141 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 RNY3P5-201ENST00000384127 102 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 NDUFA4P2-201ENST00000489989 244 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.680-201ENST00000516441 93 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 MIR3937-201ENST00000580135 106 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 AC106754.2-201ENST00000623006 233 ntBASIC2□□□□□ -2.09
PRPF38AQ8NAV1 RNY1-201ENST00000364228 113 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 RNU4-10P-201ENST00000364383 140 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 RNY4P28-201ENST00000365281 93 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 RPS27P16-201ENST00000425758 201 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 AC093850.1-201ENST00000454121 251 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 AC092991.1-201ENST00000477176 376 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 RN7SKP164-201ENST00000516138 266 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-111P-201ENST00000517179 105 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 AL513534.2-201ENST00000603836 250 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.229-201ENST00000364347 113 ntBASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 AC090049.2-201ENST00000550377 109 ntBASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 AL049861.1-201ENST00000603130 150 ntBASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 AL391903.3-201ENST00000612158 163 ntBASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 AC068700.1-201ENST00000565862 3754 ntBASIC1.98□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-653P-201ENST00000363074 106 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 SNORD38C-201ENST00000384381 69 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.515-201ENST00000384535 112 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 MIR616-201ENST00000385293 97 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 AL451046.2-201ENST00000403074 277 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 AC011921.3-201ENST00000605540 361 ntBASIC1.97□□□□□ -2.09
PRPF38AQ8NAV1 RNU6-103P-201ENST00000363686 107 ntBASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 MIR136-201ENST00000385207 82 ntBASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 MIR1298-201ENST00000408783 112 ntBASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 RNU2-55P-201ENST00000411146 174 ntBASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 RPL30P7-201ENST00000479312 323 ntBASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PRPF38AQ8NAV1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 RNA5SP363-201ENST00000365072 115 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 SNORD77.4-201ENST00000516158 81 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 RNU7-149P-201ENST00000516739 59 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-902P-201ENST00000517212 91 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 AC141273.2-201ENST00000618989 130 ntBASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PRPF38AQ8NAV1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.199-201ENST00000364014 102 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.200-201ENST00000364018 102 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.94□□□□□ -2.1
PRPF38AQ8NAV1 RNU6-381P-201ENST00000391259 108 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms