Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SNRPGP10-201ENST00000432323 225 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 SNORD11-201ENST00000459124 84 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.73□□□□□ -2.13
VPS52Q8N1B4 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 MIR8070-201ENST00000616510 88 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 AC095038.3-201ENST00000634439 195 ntBASIC1.73□□□□□ -2.13
VPS52Q8N1B4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS52Q8N1B4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS52Q8N1B4 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 MIR367-201ENST00000362299 68 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 RNU4-10P-201ENST00000364383 140 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.262-201ENST00000364641 102 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 RNU6-60P-201ENST00000364792 103 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 U8.16-201ENST00000391279 133 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 RNU6-383P-201ENST00000410864 94 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 Y_RNA.626-201ENST00000411288 95 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 CALM2P4-201ENST00000430810 426 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 PGBD4P5-201ENST00000445958 426 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 RNA5SP168-201ENST00000516642 112 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS52Q8N1B4 AC087685.1-201ENST00000587507 141 ntBASIC1.72□□□□□ -2.13
VPS52Q8N1B4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS52Q8N1B4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 AC004965.1-201ENST00000413033 213 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS52Q8N1B4 NDUFA4P2-201ENST00000489989 244 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 RPL23AP91-201ENST00000569211 455 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 JPX_2.1-201ENST00000614161 69 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 AC027279.3-201ENST00000625055 122 ntBASIC1.71□□□□□ -2.14
VPS52Q8N1B4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS52Q8N1B4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
VPS52Q8N1B4 SNORD68-201ENST00000363214 84 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.552-201ENST00000384665 112 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 MIR660-201ENST00000385235 97 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 MIR1267-201ENST00000408723 78 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 AC009474.2-201ENST00000451383 136 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 CYCTP-201ENST00000504253 315 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 RNU6-388P-201ENST00000517012 105 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 RNU6-389P-201ENST00000517048 105 ntBASIC1.7□□□□□ -2.14
VPS52Q8N1B4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS52Q8N1B4 AL442644.1-201ENST00000454390 3105 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.200-201ENST00000364018 102 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 RNU6-131P-201ENST00000391144 107 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 MIR1298-201ENST00000408783 112 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 AC015688.6-201ENST00000577737 104 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 AC120024.3-201ENST00000603167 156 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
VPS52Q8N1B4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS52Q8N1B4 MIR302D-201ENST00000362275 68 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 RNU6-833P-201ENST00000363486 107 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 RNU4-17P-201ENST00000365598 141 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 MIR499A-201ENST00000384903 122 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 RNU6-381P-201ENST00000391259 108 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS52Q8N1B4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS52Q8N1B4 AC078938.1-201ENST00000620993 318 ntBASIC1.68□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.199-201ENST00000364014 102 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 SNORA25.9-201ENST00000365087 128 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 MIR616-201ENST00000385293 97 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 RNU6-847P-201ENST00000411115 108 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.67□□□□□ -2.14
VPS52Q8N1B4 AC130289.1-201ENST00000577321 73 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 AC008507.4-201ENST00000585464 127 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 AL391903.3-201ENST00000612158 163 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 SNORD3E-202ENST00000627253 216 ntBASIC1.67□□□□□ -2.14
VPS52Q8N1B4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS52Q8N1B4 MIR411-201ENST00000362239 96 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.257-201ENST00000364596 102 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 SNORD50B-201ENST00000364995 70 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.515-201ENST00000384535 112 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS52Q8N1B4 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS52Q8N1B4 RNU6-1007P-201ENST00000516586 107 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 SNORD45.4-201ENST00000516629 73 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 uc_338.4-201ENST00000616635 176 ntBASIC1.66□□□□□ -2.14
VPS52Q8N1B4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS52Q8N1B4 Y_RNA.83-201ENST00000363005 113 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 RNY3P5-201ENST00000384127 102 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS52Q8N1B4 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 RN7SKP51-201ENST00000410781 304 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 MLLT10P1-201ENST00000418346 262 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 AC114811.1-201ENST00000507207 168 ntBASIC1.65□□□□□ -2.15
VPS52Q8N1B4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms