Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.71□□□□□ -2.14
HERC6Q8IVU3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
HERC6Q8IVU3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HERC6Q8IVU3 SNORD68-201ENST00000363214 84 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 RNU4-41P-201ENST00000364426 143 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 RNU6-211P-201ENST00000384047 107 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.489-201ENST00000384410 101 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 RNU7-141P-201ENST00000459304 62 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 AC117454.1-201ENST00000491120 168 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 RNU7-12P-201ENST00000516030 62 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 RNA5SP102-201ENST00000516865 106 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 SUMO2P16-201ENST00000519475 264 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 MIR3937-201ENST00000580135 106 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 MIR2681-201ENST00000581814 105 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 MIR4452-201ENST00000583004 71 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 AL157834.3-201ENST00000615543 103 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 AL078604.3-201ENST00000615580 211 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 MIR548AY-201ENST00000617669 107 ntBASIC1.7□□□□□ -2.14
HERC6Q8IVU3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HERC6Q8IVU3 MIR126-201ENST00000362291 85 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 RNU6-424P-201ENST00000384367 105 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 MTCO2P33-201ENST00000402100 465 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 BTF3P11-201ENST00000426582 477 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 RPL23AP54-201ENST00000495129 419 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 RNU7-115P-201ENST00000516433 55 ntBASIC1.69□□□□□ -2.14
HERC6Q8IVU3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.69□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.292-201ENST00000364904 97 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 RNY4P28-201ENST00000365281 93 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.68□□□□□ -2.14
HERC6Q8IVU3 CALM2P4-201ENST00000430810 426 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 CYCTP-201ENST00000504253 315 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 AC024405.2-202ENST00000532731 184 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 AC013791.1-201ENST00000616619 62 ntBASIC1.68□□□□□ -2.14
HERC6Q8IVU3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HERC6Q8IVU3 RNU6-899P-201ENST00000363947 107 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 RNY1-201ENST00000364228 113 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 RNU6-163P-201ENST00000384396 106 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 U8.16-201ENST00000391279 133 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 Z98949.2-201ENST00000440996 144 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.67□□□□□ -2.14
HERC6Q8IVU3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 AC127455.1-201ENST00000565496 145 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 MIR5692C2-201ENST00000577959 77 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 AC090425.1-201ENST00000610007 140 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 JPX_2.1-201ENST00000614161 69 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 AC141273.2-201ENST00000618989 130 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 AL121890.5-201ENST00000620848 304 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 AC027279.3-201ENST00000625055 122 ntBASIC1.67□□□□□ -2.14
HERC6Q8IVU3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HERC6Q8IVU3 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 RNU6-199P-201ENST00000362954 107 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 RNU6-1318P-201ENST00000365389 103 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 RNU6-42P-201ENST00000384165 107 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 MIR891A-201ENST00000401237 79 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 MLLT10P1-201ENST00000418346 262 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 AC027119.1-201ENST00000440877 241 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.66□□□□□ -2.14
HERC6Q8IVU3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.66□□□□□ -2.14
HERC6Q8IVU3 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 AC009779.6-201ENST00000603972 165 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 AL442067.1-201ENST00000613261 223 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 AL591926.4-201ENST00000616895 298 ntBASIC1.66□□□□□ -2.14
HERC6Q8IVU3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
HERC6Q8IVU3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HERC6Q8IVU3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 RNU4-10P-201ENST00000364383 140 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.257-201ENST00000364596 102 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 RNU6-144P-201ENST00000383951 107 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 RNU6-131P-201ENST00000391144 107 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 SNORA36B-201ENST00000410438 131 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 RNY3P16-201ENST00000516338 101 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.65□□□□□ -2.15
HERC6Q8IVU3 AC130289.1-201ENST00000577321 73 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
HERC6Q8IVU3 RNU6-833P-201ENST00000363486 107 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 U8.5-201ENST00000364528 136 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 MIR7-2-201ENST00000384970 110 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 SNORA12.1-201ENST00000390873 148 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 SNRPGP10-201ENST00000432323 225 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 AC108059.2-201ENST00000434626 151 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.64□□□□□ -2.15
HERC6Q8IVU3 RNU4-71P-201ENST00000516258 113 ntBASIC1.64□□□□□ -2.15
HERC6Q8IVU3 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms