Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR376A2-201ENST00000636782 80 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 AC008555.8-201ENST00000623602 2168 ntBASIC2.2□□□□□ -2.06
VRK3Q8IV63 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VRK3Q8IV63 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
VRK3Q8IV63 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VRK3Q8IV63 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VRK3Q8IV63 SNORA1B-201ENST00000362535 133 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 SNORA33-201ENST00000363664 130 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 RNU6-461P-201ENST00000364195 107 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 Y_RNA.267-201ENST00000364679 109 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 RN7SKP284-201ENST00000411002 343 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 CST2P1-201ENST00000425770 87 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.19□□□□□ -2.06
VRK3Q8IV63 CALM2P4-201ENST00000430810 426 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.19□□□□□ -2.06
VRK3Q8IV63 RNU7-94P-201ENST00000459576 63 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.19□□□□□ -2.06
VRK3Q8IV63 MIR5197-201ENST00000583721 112 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 MIR3616-201ENST00000584070 92 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 AC006441.5-201ENST00000612680 209 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 MIR4679-1-201ENST00000637619 75 ntBASIC2.19□□□□□ -2.06
VRK3Q8IV63 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VRK3Q8IV63 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
VRK3Q8IV63 U8.5-201ENST00000364528 136 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 RNU6-106P-201ENST00000384405 107 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 Y_RNA.528-201ENST00000384575 108 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 AC092427.1-202ENST00000430569 476 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 SNRPGP14-201ENST00000435400 219 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 AL049830.1-201ENST00000468034 425 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 Y_RNA.714-201ENST00000517065 90 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
VRK3Q8IV63 MIR4435-1-201ENST00000582552 80 ntBASIC2.18□□□□□ -2.06
VRK3Q8IV63 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.18□□□□□ -2.06
VRK3Q8IV63 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.17□□□□□ -2.06
VRK3Q8IV63 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VRK3Q8IV63 Y_RNA.410-201ENST00000383992 113 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 Y_RNA.495-201ENST00000384435 112 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 MIR570-201ENST00000384917 97 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 MIR1262-201ENST00000408276 93 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 MIR1263-201ENST00000408324 86 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 ATP5J2P3-201ENST00000451550 258 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
VRK3Q8IV63 COX6CP6-201ENST00000490840 228 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 RNU6-412P-201ENST00000516434 106 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.17□□□□□ -2.06
VRK3Q8IV63 AL137067.1-201ENST00000615933 120 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
VRK3Q8IV63 Y_RNA.116-201ENST00000363292 103 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 Y_RNA.366-201ENST00000365540 102 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AC007064.1-201ENST00000412238 351 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.16□□□□□ -2.06
VRK3Q8IV63 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AL031737.1-201ENST00000450125 223 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AL163195.1-201ENST00000496941 348 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AC007012.1-201ENST00000567192 175 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AC134878.1-201ENST00000619901 243 ntBASIC2.16□□□□□ -2.06
VRK3Q8IV63 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.16□□□□□ -2.06
VRK3Q8IV63 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
VRK3Q8IV63 AL442644.1-201ENST00000454390 3105 ntBASIC2.15□□□□□ -2.06
VRK3Q8IV63 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
VRK3Q8IV63 Y_RNA.85-201ENST00000363014 111 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNA5SP125-201ENST00000364843 120 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNU6-32P-201ENST00000383948 107 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNU6-13P-201ENST00000384248 107 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNU6-160P-201ENST00000384591 107 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNU6-12P-201ENST00000384604 107 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNU6-41P-201ENST00000384741 107 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 RNA5SP508-201ENST00000411327 119 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.15□□□□□ -2.07
VRK3Q8IV63 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.15□□□□□ -2.07
VRK3Q8IV63 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 uc_338.28-201ENST00000612082 187 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 U4atac.1-201ENST00000618345 95 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 AL590808.1-201ENST00000618696 141 ntBASIC2.15□□□□□ -2.07
VRK3Q8IV63 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.15□□□□□ -2.07
VRK3Q8IV63 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
VRK3Q8IV63 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VRK3Q8IV63 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.14□□□□□ -2.07
VRK3Q8IV63 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VRK3Q8IV63 MIR450A1-201ENST00000362262 91 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNA5SP493-201ENST00000364115 91 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNU6-268P-201ENST00000364174 107 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNU1-91P-201ENST00000364746 163 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNU6-1107P-201ENST00000364817 104 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNU6-1072P-201ENST00000384703 107 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNU6-443P-201ENST00000384780 107 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 MIR548O-201ENST00000408583 114 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RNU6-554P-201ENST00000410466 106 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 Z98742.3-201ENST00000418637 326 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 AL445687.1-201ENST00000439946 251 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 RPS29P24-201ENST00000486345 171 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.14□□□□□ -2.07
VRK3Q8IV63 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.14□□□□□ -2.07
VRK3Q8IV63 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms