Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 RNU6-1138P-201ENST00000365359 106 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.486-201ENST00000384398 107 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 RNU6-296P-201ENST00000384608 107 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 SNORD72-201ENST00000390994 80 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 RNU4-61P-201ENST00000411243 107 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 AL021397.1-201ENST00000451806 248 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 RNU6-717P-201ENST00000459076 104 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 OR9P1P-201ENST00000496431 281 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 RNU6-1299P-201ENST00000516316 100 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 SNORD116-25-201ENST00000516517 92 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 RNU6-197P-201ENST00000516680 100 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 MIR4762-201ENST00000585261 75 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.783-201ENST00000613546 102 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
C9orf139Q6ZV77 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 RNU6-151P-201ENST00000364158 107 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.265-201ENST00000364677 108 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.634-201ENST00000364811 113 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 SNORD50B-201ENST00000364995 70 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.337-201ENST00000365312 102 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.400-201ENST00000383963 111 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 RNU6-768P-201ENST00000384683 107 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 RNU6-131P-201ENST00000391144 107 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AL603825.1-201ENST00000438481 80 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AC069257.2-201ENST00000441819 155 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 STAG3L5P-204ENST00000443759 179 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AL392103.1-201ENST00000447000 198 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 RPL23AP63-201ENST00000498752 471 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AC008507.4-201ENST00000585464 127 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AC002984.1-201ENST00000591692 448 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AC097639.2-201ENST00000603159 172 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 Y_RNA.778-201ENST00000620203 90 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 MTND1P7-201ENST00000632801 297 ntBASIC1.59□□□□□ -2.15
C9orf139Q6ZV77 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
C9orf139Q6ZV77 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 RNU6-978P-201ENST00000364371 103 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 U8.5-201ENST00000364528 136 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 MIR520A-201ENST00000384862 85 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 RNU2-70P-201ENST00000410718 179 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 RNA5SP153-201ENST00000516498 76 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 MIR378D2-201ENST00000580636 98 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 MIR4448-201ENST00000584360 86 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 DNAJC19P2-201ENST00000593340 302 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 AP000553.5-201ENST00000641933 54 ntBASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
C9orf139Q6ZV77 MIRLET7C-201ENST00000362160 84 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 RNA5SP276-201ENST00000362580 94 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 Y_RNA.66-201ENST00000362862 102 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 Y_RNA.215-201ENST00000364204 112 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 SNORA79-201ENST00000408376 140 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 CYCSP49-201ENST00000420810 319 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 RNU7-28P-201ENST00000516759 62 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 RNU6-1116P-201ENST00000517269 99 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 MIR4662B-201ENST00000579498 81 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 MIR5089-201ENST00000580047 84 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 AC120024.3-201ENST00000603167 156 ntBASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
C9orf139Q6ZV77 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 AL359851.1-201ENST00000569460 4997 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 RNY1P11-201ENST00000363759 113 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 RNU4-11P-201ENST00000365287 132 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 RNU6-1336P-201ENST00000383886 109 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 Y_RNA.393-201ENST00000383936 102 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 Y_RNA.521-201ENST00000384560 114 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 RN7SKP200-201ENST00000410564 320 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 Y_RNA.714-201ENST00000517065 90 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 MIR4713-201ENST00000582691 75 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 AC087685.1-201ENST00000587507 141 ntBASIC1.56□□□□□ -2.16
C9orf139Q6ZV77 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
C9orf139Q6ZV77 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
C9orf139Q6ZV77 RNA5SP99-201ENST00000364020 114 ntBASIC1.55□□□□□ -2.16
C9orf139Q6ZV77 RNA5SP138-201ENST00000365098 114 ntBASIC1.55□□□□□ -2.16
C9orf139Q6ZV77 RNU6-597P-201ENST00000365620 102 ntBASIC1.55□□□□□ -2.16
C9orf139Q6ZV77 MIR569-201ENST00000385228 96 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms