Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.64□□□□□ -2.67
UBR3Q6ZT12 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 RNU6-900P-201ENST00000384498 102 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 AC096949.1-201ENST00000412047 152 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 AC073648.5-201ENST00000603502 305 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 AC127459.3-201ENST00000624328 466 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 MTND1P24-201ENST00000552175 861 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 AC022418.1-201ENST00000624118 445 ntBASIC-1.65□□□□□ -2.67
UBR3Q6ZT12 SNORD114-7-201ENST00000362520 77 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 RNU6-431P-201ENST00000383874 107 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 RNY3P14-201ENST00000384309 102 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 RNA5SP261-201ENST00000410536 106 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 USP9YP30-201ENST00000430729 455 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 MTND1P11-201ENST00000456661 876 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 AC022137.1-201ENST00000483735 151 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 RNU6-958P-201ENST00000516995 106 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 AC002044.1-201ENST00000606707 158 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 TUSC7.1-201ENST00000610969 165 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 AL445584.3-201ENST00000617173 78 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.66□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 AC073464.1-201ENST00000429823 534 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 AL391834.2-201ENST00000609982 546 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 AC019226.2-201ENST00000625973 424 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 SNORD54-201ENST00000459159 67 ntBASIC-1.67□□□□□ -2.68
UBR3Q6ZT12 RNU6-434P-201ENST00000384376 107 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 RNU6-883P-201ENST00000384597 107 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 RNU6-550P-201ENST00000391057 101 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 MTND2P18-201ENST00000419962 1030 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 RNU7-67P-201ENST00000459003 62 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 RNU6-612P-201ENST00000516909 102 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 AC004223.4-201ENST00000612426 332 ntBASIC-1.68□□□□□ -2.68
UBR3Q6ZT12 RNU6-280P-201ENST00000364145 104 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 RNU6-468P-201ENST00000384003 109 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 AC069113.1-201ENST00000517763 267 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 AP000676.1-201ENST00000533307 52 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 UBL5P4-201ENST00000562584 236 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 AC097460.3-201ENST00000623099 442 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 SNORA63.5-201ENST00000363548 123 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 MTCYBP36-201ENST00000404146 440 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 AL512506.1-201ENST00000613918 449 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 AL158209.2-201ENST00000619266 216 ntBASIC-1.69□□□□□ -2.68
UBR3Q6ZT12 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 RNU6-179P-201ENST00000363350 107 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 AC005828.6-201ENST00000606610 232 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 AC131235.4-201ENST00000609288 620 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 AC009248.2-201ENST00000619826 254 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 AP002371.2-201ENST00000624450 503 ntBASIC-1.7□□□□□ -2.68
UBR3Q6ZT12 RNU6-266P-201ENST00000364225 107 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 RNU6-715P-201ENST00000365204 103 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 RNU6-393P-201ENST00000384475 107 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 MIR450B-201ENST00000401182 78 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 AC022616.4-201ENST00000522985 181 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 RNU6-621P-201ENST00000364752 109 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 MTATP6P18-201ENST00000417994 673 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 RNA5SP484-201ENST00000458857 111 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 AC011603.4-201ENST00000611325 277 ntBASIC-1.71□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 MIR539-201ENST00000365690 78 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 AC016907.1-201ENST00000419483 435 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 RPL30P10-201ENST00000488148 337 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 U6.115-201ENST00000636045 103 ntBASIC-1.72□□□□□ -2.68
UBR3Q6ZT12 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 RNU6-268P-201ENST00000364174 107 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 SNORD24-201ENST00000383884 75 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 MIR124-2-201ENST00000385081 109 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 SNORD12C-201ENST00000386307 89 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 MTCO2P29-201ENST00000465212 189 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 RNU6-118P-201ENST00000516552 102 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 MIR4473-201ENST00000583731 91 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 AL354950.2-201ENST00000617939 290 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 SNORD14E-201ENST00000364009 85 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.73□□□□□ -2.69
UBR3Q6ZT12 ELOCP4-201ENST00000420090 333 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms