Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNA5SP272-201ENST00000516095 111 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 MIR1273D-201ENST00000577266 86 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 U7.2-201ENST00000607576 63 ntBASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RUFY4Q6ZNE9 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 SNORD50B-201ENST00000364995 70 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 SNORA80E-201ENST00000384744 137 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 AL034345.1-201ENST00000407768 123 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 AC008267.6-201ENST00000441664 139 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 SNORA18.4-201ENST00000516440 124 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 AC007751.1-201ENST00000529260 376 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 MIR4529-201ENST00000578110 78 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 SNORD14A-201ENST00000606526 91 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 AC027279.3-201ENST00000625055 122 ntBASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RUFY4Q6ZNE9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 SNORD61-201ENST00000384252 73 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 RNU6-460P-201ENST00000391158 108 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 RNU2-51P-201ENST00000410708 197 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 AL591806.2-201ENST00000433122 173 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 RNVU1-2-201ENST00000516326 135 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 RNA5SP481-201ENST00000516814 122 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 AC078899.2-201ENST00000595282 212 ntBASIC2.59□□□□□ -1.99
RUFY4Q6ZNE9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
RUFY4Q6ZNE9 RNA5SP501-201ENST00000410990 112 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 STAG3L5P-204ENST00000443759 179 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 CYCTP-201ENST00000504253 315 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 SNORA31.10-201ENST00000516482 106 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 SNORD45.4-201ENST00000516629 73 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 SNORA31.25-201ENST00000517242 134 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.58□□□□□ -2
RUFY4Q6ZNE9 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
RUFY4Q6ZNE9 SNORA20-201ENST00000384662 132 ntBASIC2.57□□□□□ -2
RUFY4Q6ZNE9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.57□□□□□ -2
RUFY4Q6ZNE9 MIR6873-201ENST00000622788 63 ntBASIC2.57□□□□□ -2
RUFY4Q6ZNE9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.57□□□□□ -2
RUFY4Q6ZNE9 RNU6-915P-201ENST00000364943 103 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 SNORD18B-201ENST00000365659 72 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 RNU6-1168P-201ENST00000390831 104 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 SNRPGP14-201ENST00000435400 219 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 RNU6-693P-201ENST00000516134 107 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 RNU6-313P-201ENST00000516317 112 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 Y_RNA.757-201ENST00000578934 114 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.56□□□□□ -2
RUFY4Q6ZNE9 AC011603.4-201ENST00000611325 277 ntBASIC2.56□□□□□ -2
RUFY4Q6ZNE9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RUFY4Q6ZNE9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.56□□□□□ -2
RUFY4Q6ZNE9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.56□□□□□ -2
RUFY4Q6ZNE9 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 RNU6-112P-201ENST00000363599 104 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 RNU6-80P-201ENST00000384195 107 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 MIR891A-201ENST00000401237 79 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 Y_RNA.692-201ENST00000516627 105 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.55□□□□□ -2
RUFY4Q6ZNE9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.55□□□□□ -2
RUFY4Q6ZNE9 MIRLET7C-201ENST00000362160 84 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 SNORD114-1-201ENST00000362705 72 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 SNORA3A-201ENST00000364113 130 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 RNU6-268P-201ENST00000364174 107 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 Y_RNA.410-201ENST00000383992 113 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 MIR548A2-201ENST00000384956 97 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 AL603914.1-201ENST00000401964 204 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 MIR1289-2-201ENST00000408360 111 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 RNU2-7P-201ENST00000410794 178 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 RNA5SP450-201ENST00000411206 102 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 AL158823.1-201ENST00000418441 478 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 MTATP6P21-201ENST00000440681 189 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.54□□□□□ -2
RUFY4Q6ZNE9 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 RNU6-971P-201ENST00000516920 106 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 RNU1-104P-201ENST00000517280 175 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 AC134878.1-201ENST00000619901 243 ntBASIC2.54□□□□□ -2
RUFY4Q6ZNE9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RUFY4Q6ZNE9 MIRLET7G-201ENST00000362280 84 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNY1P11-201ENST00000363759 113 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 SNORD116-14-201ENST00000383894 92 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 SNORD116-17-201ENST00000383929 92 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 SNORA1-201ENST00000384107 130 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 SNORD116-15-201ENST00000384445 92 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNU6-296P-201ENST00000384608 107 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 SNORD116-19-201ENST00000384729 92 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 MIR518F-201ENST00000384973 87 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNU6-1154P-201ENST00000391001 104 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 MIR548O-201ENST00000408583 114 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNU6-1211P-201ENST00000459179 105 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.53□□□□□ -2
RUFY4Q6ZNE9 MIR3129-201ENST00000581095 76 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms