Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AP003181.2-201ENST00000528941 181 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 MTCO3P23-201ENST00000561363 289 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 AC073648.5-201ENST00000603502 305 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 AC087752.4-201ENST00000605911 462 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 AC009248.2-201ENST00000619826 254 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 AP002371.2-201ENST00000624450 503 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU6-324P-201ENST00000363957 106 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 SNORD50B-201ENST00000364995 70 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU4-66P-201ENST00000365199 138 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU6-715P-201ENST00000365204 103 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 MIR204-201ENST00000385200 110 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RPL7P42-201ENST00000481005 679 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 SNORD27.1-201ENST00000516319 72 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 AL158050.2-201ENST00000605336 568 ntBASIC-0.82□□□□□ -2.54
CSPG4Q6UVK1 MIR20A-201ENST00000362279 71 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 RNU6-403P-201ENST00000363163 104 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 RNU6-792P-201ENST00000363490 107 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 U8.15-201ENST00000390947 134 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 RNU2-29P-201ENST00000410423 189 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AL031667.1-201ENST00000440222 725 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC244505.6-201ENST00000452829 130 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC022137.1-201ENST00000483735 151 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC022784.5-201ENST00000522241 437 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC064836.2-201ENST00000609491 462 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC126544.2-201ENST00000625174 749 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 SNORA63.5-201ENST00000363548 123 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 SNORA72-201ENST00000384339 132 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 SNORD116-12-201ENST00000384468 92 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 RPL30P16-201ENST00000419341 429 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 SNORD2-201ENST00000459163 69 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC091144.1-201ENST00000519573 138 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 MIR4423-201ENST00000580922 80 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC005972.2-201ENST00000604690 348 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AL133255.1-201ENST00000606374 441 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AL391834.2-201ENST00000609982 546 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC091931.1-201ENST00000623488 728 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 MIR382-201ENST00000637119 76 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 AC007671.2-201ENST00000637344 619 ntBASIC-0.83□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 RNU7-104P-201ENST00000459398 79 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 RNU6-329P-201ENST00000459618 107 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 AC008536.2-201ENST00000607284 349 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 DISC2.1-201ENST00000612827 205 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 U6.114-201ENST00000636407 96 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 MIR410-201ENST00000362222 80 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 SNORD115-7-201ENST00000365306 82 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 MIR517B-201ENST00000385102 67 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 RPS27AP14-201ENST00000422868 454 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 MTATP6P26-201ENST00000445926 662 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 RNU6-107P-201ENST00000516643 102 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 MIR5591-201ENST00000578248 65 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 AL512506.1-201ENST00000613918 449 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.84□□□□□ -2.54
CSPG4Q6UVK1 RNU6-621P-201ENST00000364752 109 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 RNU6-865P-201ENST00000364772 107 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 RNU6-449P-201ENST00000383914 107 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 SNORD64-201ENST00000386683 67 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 MIR1284-201ENST00000408337 120 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 AC236972.2-201ENST00000434979 310 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 RNU6-830P-201ENST00000516353 107 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 AC022878.1-201ENST00000530684 149 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 AP000676.1-201ENST00000533307 52 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 MTND1P24-201ENST00000552175 861 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 JPX_2.1-201ENST00000614161 69 ntBASIC-0.85□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 RNU6-179P-201ENST00000363350 107 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 RNU6-454P-201ENST00000364292 107 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 RNU6-136P-201ENST00000384663 107 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 GPR143P-201ENST00000434155 205 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 Z82188.1-201ENST00000436709 154 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 MIR335-201ENST00000362173 94 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 SNORD114-29-201ENST00000364819 70 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 RNU7-25P-201ENST00000516544 62 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 MIR6854-201ENST00000614935 69 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 AP001282.2-201ENST00000616149 309 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 AC069503.3-201ENST00000618674 145 ntBASIC-0.86□□□□□ -2.55
CSPG4Q6UVK1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.87□□□□□ -2.55
CSPG4Q6UVK1 SNORA26.6-201ENST00000391256 115 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms