Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC113410.1-201ENST00000505029 247 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 AC104465.1-201ENST00000611365 139 ntBASIC0.66□□□□□ -2.3
ATL3Q6DD88 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.66□□□□□ -2.3
ATL3Q6DD88 Y_RNA.39-201ENST00000362620 98 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 Y_RNA.148-201ENST00000363557 117 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 RNU6-674P-201ENST00000363831 107 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 RNU6-937P-201ENST00000384325 106 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 MTND1P14-201ENST00000427400 950 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 U8.20-201ENST00000459445 131 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 RNU6-507P-201ENST00000516045 100 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 RNU6-976P-201ENST00000516086 111 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 AC093027.1-201ENST00000546698 429 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 AC023827.1-201ENST00000569247 97 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 MIR3145-201ENST00000580727 82 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 AC087685.1-201ENST00000587507 141 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 MIR6516-201ENST00000630554 81 ntBASIC0.65□□□□□ -2.31
ATL3Q6DD88 Y_RNA.143-201ENST00000363520 106 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU6-268P-201ENST00000364174 107 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU4-50P-201ENST00000364361 141 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU1-133P-201ENST00000364867 167 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 Y_RNA.439-201ENST00000384119 94 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU4-30P-201ENST00000410245 143 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU2-14P-201ENST00000411053 191 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU6-130P-201ENST00000411112 103 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RPL23AP54-201ENST00000495129 419 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RNU7-110P-201ENST00000516891 62 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 RPS29P30-201ENST00000600975 111 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 PART1_1.1-201ENST00000611761 217 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 MIR548AY-201ENST00000617669 107 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 AL138825.1-201ENST00000618587 192 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 AC008133.2-201ENST00000624540 351 ntBASIC0.64□□□□□ -2.31
ATL3Q6DD88 Y_RNA.58-201ENST00000362807 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 Y_RNA.154-201ENST00000363624 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 Y_RNA.197-201ENST00000364004 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 SNORD14E-201ENST00000364009 85 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 Y_RNA.222-201ENST00000364264 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 Y_RNA.286-201ENST00000364813 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 RNY3P1-201ENST00000365085 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 RNY3-201ENST00000365484 102 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.63□□□□□ -2.31
ATL3Q6DD88 Y_RNA.661-201ENST00000516003 99 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 DEFB108E-201ENST00000524692 240 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 MIR1273G-201ENST00000577677 100 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 AC008507.4-201ENST00000585464 127 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 Pinc.1-201ENST00000616452 154 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 AC112487.2-201ENST00000637950 304 ntBASIC0.63□□□□□ -2.31
ATL3Q6DD88 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 Y_RNA.383-201ENST00000383855 97 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 RNU6-1009P-201ENST00000390996 107 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 AL603910.2-201ENST00000407268 136 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 SNORD111-201ENST00000408139 94 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 MIR1278-201ENST00000408753 81 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 SNORA36B-201ENST00000410438 131 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 AC024067.1-201ENST00000426199 223 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 AC236972.2-201ENST00000434979 310 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 MTND5P20-201ENST00000448677 143 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.62□□□□□ -2.31
ATL3Q6DD88 RNU7-141P-201ENST00000459304 62 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 AC006441.5-201ENST00000612680 209 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.62□□□□□ -2.31
ATL3Q6DD88 MIR4251-201ENST00000635819 61 ntBASIC0.62□□□□□ -2.31
ATL3Q6DD88 RNU6-1048P-201ENST00000364054 107 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 RNU6-654P-201ENST00000364373 107 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 SNORD113.3-201ENST00000364630 78 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 RNU6-442P-201ENST00000383968 104 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 SNORD38C-201ENST00000384381 69 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 Y_RNA.579-201ENST00000390939 94 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 U8.17-201ENST00000391292 132 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 MIR1302-11-201ENST00000408051 138 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 MIR1302-9-201ENST00000408365 138 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 MIR1302-10-201ENST00000408734 138 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 AC098869.1-201ENST00000481627 292 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 SEPT14P8-201ENST00000508026 178 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 RNU2-13P-201ENST00000515909 113 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 RNU6-475P-201ENST00000516073 104 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 Y_RNA.713-201ENST00000517013 96 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 MIR2681-201ENST00000581814 105 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 MIR1302-2-201ENST00000607096 138 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.61□□□□□ -2.31
ATL3Q6DD88 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
ATL3Q6DD88 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ATL3Q6DD88 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
ATL3Q6DD88 Y_RNA.813-201ENST00000364639 102 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 Y_RNA.356-201ENST00000365475 113 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 Y_RNA.395-201ENST00000383945 109 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 SNORA72.4-201ENST00000384174 132 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 RNY3P14-201ENST00000384309 102 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 SNORA26.5-201ENST00000391215 123 ntBASIC0.6□□□□□ -2.31
ATL3Q6DD88 RNU6-613P-201ENST00000410412 108 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms