Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SNORD14E-201ENST00000364009 85 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 RNU4-17P-201ENST00000365598 141 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 MIR653-201ENST00000385279 96 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 SNRPGP14-201ENST00000435400 219 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 RNA5SP445-201ENST00000515889 115 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 SCARNA8-201ENST00000515924 131 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 AP000942.4-201ENST00000604811 241 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 MIR6715A-201ENST00000615929 79 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 AL442644.1-201ENST00000454390 3105 ntBASIC1.57□□□□□ -2.16
RUNDC3AQ59EK9 MIR452-201ENST00000385020 85 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 MT-TT-201ENST00000387460 66 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 AC245517.4-201ENST00000448601 281 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 RNU1-98P-201ENST00000458992 160 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 COX6CP14-201ENST00000469580 174 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 SNORD77.4-201ENST00000516158 81 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 RNU7-149P-201ENST00000516739 59 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 AC090142.3-201ENST00000519012 385 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
RUNDC3AQ59EK9 SNORD33-201ENST00000362761 85 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 SNORA2.2-201ENST00000365473 135 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-442P-201ENST00000383968 104 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 MIR516B2-201ENST00000385190 85 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 SNORD41-201ENST00000386967 70 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 AC023449.1-201ENST00000454464 154 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-922P-201ENST00000516753 99 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-295P-201ENST00000516901 104 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 AC009779.6-201ENST00000603972 165 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.55□□□□□ -2.16
RUNDC3AQ59EK9 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 MIR616-201ENST00000385293 97 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 Y_RNA.587-201ENST00000391210 103 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-493P-201ENST00000391321 108 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 AC015922.2-201ENST00000435593 184 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-1007P-201ENST00000516586 107 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 AL391903.3-201ENST00000612158 163 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 MIR6845-201ENST00000613182 61 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 AC078938.1-201ENST00000620993 318 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 MIR7843-201ENST00000622274 79 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 AC084768.2-201ENST00000622736 221 ntBASIC1.54□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-268P-201ENST00000364174 107 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-923P-201ENST00000364753 107 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 MIR802-201ENST00000390235 94 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 U8.13-201ENST00000390842 128 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RN7SKP164-201ENST00000516138 266 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-388P-201ENST00000517012 105 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-389P-201ENST00000517048 105 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 MIR4308-201ENST00000580634 81 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 FAM106DP-201ENST00000586416 501 ntBASIC1.53□□□□□ -2.16
RUNDC3AQ59EK9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.199-201ENST00000364014 102 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.476-201ENST00000384347 108 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 MIR504-201ENST00000385065 83 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 CYCSP49-201ENST00000420810 319 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 AL591806.2-201ENST00000433122 173 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 AC130289.1-201ENST00000577321 73 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 AC104984.5-201ENST00000586878 94 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 AL513534.2-201ENST00000603836 250 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 AC006441.5-201ENST00000612680 209 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RUNDC3AQ59EK9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 MIR411-201ENST00000362239 96 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.200-201ENST00000364018 102 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 AL451046.2-201ENST00000403074 277 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 AL606845.1-201ENST00000404881 255 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 AL512310.8-201ENST00000550183 120 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 Pinc.1-201ENST00000616452 154 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 AC141273.2-201ENST00000618989 130 ntBASIC1.51□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.242-201ENST00000364473 110 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-484P-201ENST00000384016 107 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 RNY3P5-201ENST00000384127 102 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 Y_RNA.486-201ENST00000384398 107 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 MIR136-201ENST00000385207 82 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 MIR764-201ENST00000390811 85 ntBASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.5□□□□□ -2.17
RUNDC3AQ59EK9 RNU6-322P-201ENST00000516010 103 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms