Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MTND5P34-201ENST00000568888 325 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 MIR8055-201ENST00000610739 97 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 RNU6-900P-201ENST00000384498 102 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 USP9YP12-201ENST00000450481 570 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 AC022137.1-201ENST00000483735 151 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 MTCO1P29-201ENST00000496868 288 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 SNORD22.1-201ENST00000516331 125 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 AC040926.1-201ENST00000530195 238 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 AC090616.2-202ENST00000584248 222 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 AC005972.2-201ENST00000604690 348 ntBASIC-1.75□□□□□ -2.69
CCDC58Q4VC31 AL596211.1-201ENST00000569873 2277 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 MIR410-201ENST00000362222 80 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 RPL39P25-201ENST00000449384 154 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 RNU6-175P-201ENST00000516896 107 ntBASIC-1.76□□□□□ -2.69
CCDC58Q4VC31 RNA5SP245-201ENST00000364239 121 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 RNU6-157P-201ENST00000383957 107 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 MIR147A-201ENST00000385079 72 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 RNU6-602P-201ENST00000411155 105 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 RNU7-67P-201ENST00000459003 62 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 MIR4423-201ENST00000580922 80 ntBASIC-1.77□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 RNA5SP118-201ENST00000410385 109 ntBASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 AC131281.1-201ENST00000522984 164 ntBASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 AC134698.4-201ENST00000523451 826 ntBASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 AP001542.1-201ENST00000591314 200 ntBASIC-1.78□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.79□□□□□ -2.7
CCDC58Q4VC31 MTND2P9-201ENST00000422293 931 ntBASIC-1.79□□□□□ -2.7
CCDC58Q4VC31 USP9YP16-201ENST00000430287 407 ntBASIC-1.79□□□□□ -2.7
CCDC58Q4VC31 AP000533.3-201ENST00000447704 118 ntBASIC-1.79□□□□□ -2.7
CCDC58Q4VC31 AC027807.2-201ENST00000616099 408 ntBASIC-1.79□□□□□ -2.7
CCDC58Q4VC31 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 RNU6-454P-201ENST00000364292 107 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 RNU6-865P-201ENST00000364772 107 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 RNU6-1257P-201ENST00000384625 110 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 RNU6-913P-201ENST00000390913 95 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 SNORD41.1-201ENST00000391000 69 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 MTND2P18-201ENST00000419962 1030 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 AL031667.1-201ENST00000440222 725 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 RNA5SP484-201ENST00000458857 111 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 Z84480.1-201ENST00000605131 311 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 AC004223.4-201ENST00000612426 332 ntBASIC-1.8□□□□□ -2.7
CCDC58Q4VC31 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 SNORA72-201ENST00000384339 132 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 SNORD12C-201ENST00000386307 89 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 RNU7-161P-201ENST00000517289 62 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 AC087683.2-201ENST00000611384 326 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 AL391262.2-201ENST00000622466 494 ntBASIC-1.81□□□□□ -2.7
CCDC58Q4VC31 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 RNU4-32P-201ENST00000363404 141 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 RNU4-28P-201ENST00000364739 141 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 RNU6-702P-201ENST00000364982 107 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 RNU6-903P-201ENST00000391270 109 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 MTATP6P17-201ENST00000431030 672 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 AC109347.2-201ENST00000610220 349 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 MIR4320-201ENST00000636981 65 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 AC099654.12-201ENST00000639868 649 ntBASIC-1.82□□□□□ -2.7
CCDC58Q4VC31 RNU4-68P-201ENST00000364314 141 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 RNU6-281P-201ENST00000384212 103 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 SNORD57-201ENST00000448188 72 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 RNU6-437P-201ENST00000459408 95 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 RNU6-958P-201ENST00000516995 106 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 AC138207.3-201ENST00000585289 166 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 AL133215.3-201ENST00000609801 448 ntBASIC-1.83□□□□□ -2.7
CCDC58Q4VC31 MIR539-201ENST00000365690 78 ntBASIC-1.84□□□□□ -2.7
CCDC58Q4VC31 SNORA72.6-201ENST00000384520 129 ntBASIC-1.84□□□□□ -2.7
CCDC58Q4VC31 MIR181B2-201ENST00000385004 89 ntBASIC-1.84□□□□□ -2.7
CCDC58Q4VC31 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 snoU13.13-201ENST00000458842 104 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 MIR4491-201ENST00000581087 68 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 AC018714.1-201ENST00000605028 208 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 AL391834.2-201ENST00000609982 546 ntBASIC-1.85□□□□□ -2.71
CCDC58Q4VC31 SNORA63.5-201ENST00000363548 123 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 SNORD115-42-201ENST00000364273 82 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 RNU7-180P-201ENST00000459240 63 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 AC026421.1-201ENST00000519101 163 ntBASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
CCDC58Q4VC31 AC024405.2-202ENST00000532731 184 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms