Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.89□□□□□ -2.71
HMGN3Q15651 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 AC104576.1-201ENST00000524225 88 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 AC008507.2-201ENST00000588402 1176 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 MIR382-201ENST00000637119 76 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 SNORD115-32-201ENST00000364079 82 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 RNU6-702P-201ENST00000364982 107 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 RNU6-325P-201ENST00000411132 105 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 U8.19-201ENST00000459095 133 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 U8.22-201ENST00000459141 133 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 SCOCP1-201ENST00000554676 349 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.9□□□□□ -2.71
HMGN3Q15651 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.91□□□□□ -2.72
HMGN3Q15651 SNORD115.1-201ENST00000391109 76 ntBASIC-1.91□□□□□ -2.72
HMGN3Q15651 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.91□□□□□ -2.72
HMGN3Q15651 RNU7-167P-201ENST00000459160 62 ntBASIC-1.91□□□□□ -2.72
HMGN3Q15651 MIR4775-201ENST00000581168 75 ntBASIC-1.91□□□□□ -2.72
HMGN3Q15651 MIR3941-201ENST00000582572 103 ntBASIC-1.91□□□□□ -2.72
HMGN3Q15651 SNORD114-7-201ENST00000362520 77 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 RNU6-767P-201ENST00000384132 107 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 RNU6-533P-201ENST00000384144 107 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 RNU6-606P-201ENST00000384721 111 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 RNA5SP475-201ENST00000410568 110 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 RNU6-966P-201ENST00000516479 104 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.92□□□□□ -2.72
HMGN3Q15651 PIGPP4-201ENST00000584447 307 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.92□□□□□ -2.72
HMGN3Q15651 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.93□□□□□ -2.72
HMGN3Q15651 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.93□□□□□ -2.72
HMGN3Q15651 RNU7-53P-201ENST00000516705 60 ntBASIC-1.93□□□□□ -2.72
HMGN3Q15651 snoU83B.1-201ENST00000517136 88 ntBASIC-1.93□□□□□ -2.72
HMGN3Q15651 RNU6-706P-201ENST00000517229 104 ntBASIC-1.93□□□□□ -2.72
HMGN3Q15651 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
HMGN3Q15651 AC091931.1-201ENST00000623488 728 ntBASIC-1.93□□□□□ -2.72
HMGN3Q15651 SNORD115-34-201ENST00000362441 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-12-201ENST00000362583 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-29-201ENST00000362834 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-9-201ENST00000362912 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-21-201ENST00000362963 81 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-14-201ENST00000363090 81 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-13-201ENST00000363358 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-11-201ENST00000363616 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-5-201ENST00000363633 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-39-201ENST00000363694 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-4-201ENST00000363810 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-16-201ENST00000363887 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-6-201ENST00000363942 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-42-201ENST00000364273 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-15-201ENST00000364809 81 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-1-201ENST00000364961 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-26-201ENST00000365067 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-10-201ENST00000365073 81 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-43-201ENST00000365503 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-36-201ENST00000365629 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 AP000942.4-201ENST00000604811 241 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 SNORD115-40-201ENST00000606510 82 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 AC007671.2-201ENST00000637344 619 ntBASIC-1.94□□□□□ -2.72
HMGN3Q15651 RNU6-454P-201ENST00000364292 107 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 RNU6-169P-201ENST00000365336 107 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 MIR626-201ENST00000385032 94 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 MIR147A-201ENST00000385079 72 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 AL603914.1-201ENST00000401964 204 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.95□□□□□ -2.72
HMGN3Q15651 SEPT14P19-203ENST00000633205 211 ntBASIC-1.95□□□□□ -2.72
HMGN3Q15651 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 SNORD115-2-201ENST00000362842 82 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 SNORA72-201ENST00000384339 132 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 AC074085.1-201ENST00000413598 418 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 AL031667.1-201ENST00000440222 725 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 RNU6-531P-201ENST00000516694 104 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.96□□□□□ -2.72
HMGN3Q15651 MIR4703-201ENST00000577728 79 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 TUSC7.1-201ENST00000610969 165 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 U2.17-201ENST00000611454 95 ntBASIC-1.96□□□□□ -2.72
HMGN3Q15651 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 RNU4-66P-201ENST00000365199 138 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 RNU6-154P-201ENST00000384306 106 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 RNU4-55P-201ENST00000410731 137 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 RNU7-55P-201ENST00000459426 62 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 AC016550.1-201ENST00000505348 785 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 AC040926.1-201ENST00000530195 238 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 AC093023.1-201ENST00000547375 507 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 MIR5704-201ENST00000584029 77 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 AC005771.1-201ENST00000585581 349 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 AC004223.4-201ENST00000612426 332 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 JPX_2.1-201ENST00000614161 69 ntBASIC-1.97□□□□□ -2.72
HMGN3Q15651 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.98□□□□□ -2.73
HMGN3Q15651 MTCO1P29-201ENST00000496868 288 ntBASIC-1.98□□□□□ -2.73
HMGN3Q15651 RNU6-410P-201ENST00000517006 107 ntBASIC-1.98□□□□□ -2.73
HMGN3Q15651 AC141846.1-201ENST00000568348 142 ntBASIC-1.98□□□□□ -2.73
HMGN3Q15651 MIR3115-201ENST00000577915 68 ntBASIC-1.98□□□□□ -2.73
HMGN3Q15651 MIR548AE1-201ENST00000583292 70 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms