Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MTATP6P18-201ENST00000417994 673 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MTATP6P14-201ENST00000455189 673 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 RNU6-437P-201ENST00000459408 95 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.27□□□□□ -2.61
HMGXB3Q12766 RNU6-107P-201ENST00000516643 102 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MTND1P24-201ENST00000552175 861 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MIR3179-1-201ENST00000578940 84 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MIR3179-2-201ENST00000579107 84 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MIR3179-3-201ENST00000579566 84 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 MIR3179-4-201ENST00000617599 84 ntBASIC-1.27□□□□□ -2.61
HMGXB3Q12766 SNORD115-32-201ENST00000364079 82 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 U8.15-201ENST00000390947 134 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 AL445193.1-201ENST00000441183 141 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 USP9YP12-201ENST00000450481 570 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 AC244505.6-201ENST00000452829 130 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 RNU7-67P-201ENST00000459003 62 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 RNU6-175P-201ENST00000516896 107 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 AL049777.1-201ENST00000622740 518 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.28□□□□□ -2.61
HMGXB3Q12766 RNU4-75P-201ENST00000364621 146 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 SNORD115-44-201ENST00000365391 82 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 RNU6-901P-201ENST00000384593 106 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 AC074085.1-201ENST00000413598 418 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 RNU6-958P-201ENST00000516995 106 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.29□□□□□ -2.62
HMGXB3Q12766 MIR4775-201ENST00000581168 75 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 AC009248.2-201ENST00000619826 254 ntBASIC-1.29□□□□□ -2.62
HMGXB3Q12766 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-880P-201ENST00000384526 107 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC096949.1-201ENST00000412047 152 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RPL39P25-201ENST00000449384 154 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC112204.1-201ENST00000502591 103 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-86P-201ENST00000606534 107 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 SNORD114-29-201ENST00000364819 70 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-541P-201ENST00000384709 110 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 SNORD73A-201ENST00000386062 65 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-159P-201ENST00000391080 106 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU7-138P-201ENST00000459479 64 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RPL30P10-201ENST00000488148 337 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.3□□□□□ -2.62
HMGXB3Q12766 SCOCP1-201ENST00000554676 349 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC140658.3-201ENST00000567603 271 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AL356055.1-201ENST00000602528 446 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 AC011458.1-201ENST00000604034 617 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 TUSC7.1-201ENST00000610969 165 ntBASIC-1.3□□□□□ -2.62
HMGXB3Q12766 SNORA20.2-201ENST00000383922 131 ntBASIC-1.31□□□□□ -2.62
HMGXB3Q12766 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.31□□□□□ -2.62
HMGXB3Q12766 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
HMGXB3Q12766 RNU6-913P-201ENST00000390913 95 ntBASIC-1.31□□□□□ -2.62
HMGXB3Q12766 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.31□□□□□ -2.62
HMGXB3Q12766 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.31□□□□□ -2.62
HMGXB3Q12766 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.31□□□□□ -2.62
HMGXB3Q12766 PIGPP4-201ENST00000584447 307 ntBASIC-1.31□□□□□ -2.62
HMGXB3Q12766 MIR410-201ENST00000362222 80 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 MTND1P11-201ENST00000456661 876 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 RPL30P15-201ENST00000457129 321 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 GMFBP1-201ENST00000467831 427 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.32□□□□□ -2.62
HMGXB3Q12766 AP003181.2-201ENST00000528941 181 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 AC080013.3-201ENST00000606839 578 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 AC011373.1-201ENST00000607270 237 ntBASIC-1.32□□□□□ -2.62
HMGXB3Q12766 RNA5SP403-201ENST00000363598 108 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 SNORD74.6-201ENST00000364796 70 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 RNU6-809P-201ENST00000384461 107 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 USP9YP30-201ENST00000430729 455 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 RNA5SP484-201ENST00000458857 111 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.33□□□□□ -2.62
HMGXB3Q12766 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 MTND4LP18-201ENST00000526864 291 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 CPDP1-201ENST00000579660 283 ntBASIC-1.33□□□□□ -2.62
HMGXB3Q12766 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 RNU6-169P-201ENST00000365336 107 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 SNORD64-201ENST00000386683 67 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 RNU2-29P-201ENST00000410423 189 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 RNU7-167P-201ENST00000459160 62 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 UBL5P4-201ENST00000562584 236 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 AC109347.2-201ENST00000610220 349 ntBASIC-1.34□□□□□ -2.62
HMGXB3Q12766 RNU6-702P-201ENST00000364982 107 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AL031667.1-201ENST00000440222 725 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AC022137.1-201ENST00000483735 151 ntBASIC-1.35□□□□□ -2.62
HMGXB3Q12766 AC105417.1-201ENST00000514691 285 ntBASIC-1.35□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms