Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 AC124312.5-201ENST00000604451 268 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 7SK.10-201ENST00000621414 298 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 MIR6516-201ENST00000630554 81 ntBASIC0.81□□□□□ -2.28
SCN1BQ07699 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
SCN1BQ07699 RNU6-53P-201ENST00000365367 106 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 Y_RNA.395-201ENST00000383945 109 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 AL603910.2-201ENST00000407268 136 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 RNA5SP95-201ENST00000410319 137 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 RPS26P5-201ENST00000418544 335 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 AC005534.2-201ENST00000431047 433 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 SNORD11-201ENST00000459124 84 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.8□□□□□ -2.28
SCN1BQ07699 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN1BQ07699 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.8□□□□□ -2.28
SCN1BQ07699 MIR4498-201ENST00000577599 66 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 AL359821.1-201ENST00000605519 182 ntBASIC0.8□□□□□ -2.28
SCN1BQ07699 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SCN1BQ07699 Y_RNA.31-201ENST00000362574 102 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 Y_RNA.222-201ENST00000364264 102 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 RNU6-450P-201ENST00000364654 107 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 Y_RNA.445-201ENST00000384168 102 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.79□□□□□ -2.28
SCN1BQ07699 AC067940.1-201ENST00000458411 300 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 AC012433.1-201ENST00000588916 398 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 AC104695.3-201ENST00000604052 296 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 RAC1P9-201ENST00000604990 392 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 AC090574.1-201ENST00000623186 233 ntBASIC0.79□□□□□ -2.28
SCN1BQ07699 SNORA51.10-201ENST00000384418 136 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 SNORA2B-201ENST00000384583 137 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SCN1BQ07699 HSPE1P25-201ENST00000455484 251 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 U7.7-201ENST00000459276 60 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 RNU6-1007P-201ENST00000516586 107 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 Y_RNA.715-201ENST00000517082 110 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN1BQ07699 LARP7P1-201ENST00000605576 316 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 AC090971.5-201ENST00000621102 293 ntBASIC0.78□□□□□ -2.28
SCN1BQ07699 SNORD114-27-201ENST00000363766 70 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 RNU6-899P-201ENST00000363947 107 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 SNORD113.3-201ENST00000364630 78 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 SNORD42.2-201ENST00000365570 69 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 SNORA63.7-201ENST00000365579 123 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 Y_RNA.370-201ENST00000365589 108 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 Y_RNA.431-201ENST00000384086 102 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 RNU6-763P-201ENST00000390865 106 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 SNORD111-201ENST00000408139 94 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 SNORD99-201ENST00000408612 74 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 AC022028.1-201ENST00000412054 408 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 Y_RNA.639-201ENST00000458981 102 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 MIR2115-201ENST00000516657 100 ntBASIC0.77□□□□□ -2.29
SCN1BQ07699 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.77□□□□□ -2.29
SCN1BQ07699 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 Y_RNA.136-201ENST00000363444 102 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 RNU6-1205P-201ENST00000363625 106 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 Y_RNA.183-201ENST00000363882 113 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 RNU6-1067P-201ENST00000384752 107 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 Y_RNA.645-201ENST00000391229 102 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN1BQ07699 AL603825.1-201ENST00000438481 80 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 MRPS35P2-201ENST00000508242 191 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 RNU6-496P-201ENST00000516145 99 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 RNU6-764P-201ENST00000516396 105 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 RNU6-897P-201ENST00000517135 105 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 AC006441.5-201ENST00000612680 209 ntBASIC0.76□□□□□ -2.29
SCN1BQ07699 RNU4-90P-201ENST00000362773 141 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 Y_RNA.569-201ENST00000384749 103 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 RNU6-823P-201ENST00000391042 103 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 PMCHL1-202ENST00000423102 261 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 MTCO1P5-201ENST00000433573 344 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 RNU6-1110P-201ENST00000516462 101 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 AC025627.3-201ENST00000582078 182 ntBASIC0.75□□□□□ -2.29
SCN1BQ07699 Y_RNA.4-201ENST00000362333 112 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 Y_RNA.242-201ENST00000364473 110 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 SNORA1.2-201ENST00000365189 134 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 SNORD115-46-201ENST00000390982 71 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 RNU6-613P-201ENST00000410412 108 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 RNU6-321P-201ENST00000410912 106 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 MTATP6P23-201ENST00000440153 476 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 RNU4-57P-201ENST00000515980 135 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 RNU6-351P-201ENST00000516097 100 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN1BQ07699 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN1BQ07699 MIR548AO-201ENST00000579992 96 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 C8orf59P2-201ENST00000603441 271 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 MIR4791-201ENST00000607666 84 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 MTND1P7-201ENST00000632801 297 ntBASIC0.74□□□□□ -2.29
SCN1BQ07699 Y_RNA.224-201ENST00000364308 111 ntBASIC0.73□□□□□ -2.29
SCN1BQ07699 Y_RNA.537-201ENST00000384626 109 ntBASIC0.73□□□□□ -2.29
SCN1BQ07699 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms