Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 Y_RNA.119-201ENST00000363301 96 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 RNU6-853P-201ENST00000364306 107 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 SNORD50B-201ENST00000364995 70 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 RNU6-117P-201ENST00000365415 107 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 RNU5E-6P-201ENST00000365574 115 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 SNORA72.6-201ENST00000384520 129 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 MIR487B-201ENST00000385021 84 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 RNU2-39P-201ENST00000410604 198 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 AC114878.1-201ENST00000441166 358 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 RNU7-140P-201ENST00000459546 60 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.73□□□□□ -2.85
TFF3Q07654 AC090616.2-202ENST00000584248 222 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 AL445435.1-201ENST00000604232 665 ntBASIC-2.73□□□□□ -2.85
TFF3Q07654 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 RNU6-602P-201ENST00000411155 105 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-2.74□□□□□ -2.85
TFF3Q07654 AC096949.1-201ENST00000412047 152 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 MTATP6P18-201ENST00000417994 673 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 RNU7-181P-201ENST00000517234 74 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 MIR548AE1-201ENST00000583292 70 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.74□□□□□ -2.85
TFF3Q07654 SNORA49-201ENST00000386157 136 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 RNU4-61P-201ENST00000411243 107 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 AC018865.2-201ENST00000423631 129 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 AL137792.2-201ENST00000443484 235 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 AL357078.3-201ENST00000607528 618 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 PART1_1.1-201ENST00000611761 217 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 AC139792.3-201ENST00000623525 224 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 AC068137.4-201ENST00000638485 296 ntBASIC-2.75□□□□□ -2.85
TFF3Q07654 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.76□□□□□ -2.85
TFF3Q07654 RNU6-549P-201ENST00000384433 107 ntBASIC-2.76□□□□□ -2.85
TFF3Q07654 RNU6-1122P-201ENST00000384449 107 ntBASIC-2.76□□□□□ -2.85
TFF3Q07654 Y_RNA.517-201ENST00000384551 106 ntBASIC-2.76□□□□□ -2.85
TFF3Q07654 EEF1A1P40-201ENST00000412883 573 ntBASIC-2.76□□□□□ -2.85
TFF3Q07654 MTCO2P27-201ENST00000420740 428 ntBASIC-2.76□□□□□ -2.85
TFF3Q07654 RNA5SP405-201ENST00000363059 114 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 SNORD56.4-201ENST00000363883 71 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 SNORD115-26-201ENST00000365067 82 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 MTND4P3-201ENST00000417829 541 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-2.77□□□□□ -2.85
TFF3Q07654 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 YWHAEP2-201ENST00000580066 112 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 AC132825.7-201ENST00000638744 335 ntBASIC-2.77□□□□□ -2.85
TFF3Q07654 RNU6-353P-201ENST00000364266 108 ntBASIC-2.78□□□□□ -2.85
TFF3Q07654 Y_RNA.231-201ENST00000364358 102 ntBASIC-2.78□□□□□ -2.85
TFF3Q07654 SNORA20B-201ENST00000384220 132 ntBASIC-2.78□□□□□ -2.85
TFF3Q07654 RNU2-10P-201ENST00000516375 211 ntBASIC-2.78□□□□□ -2.85
TFF3Q07654 AP002782.1-201ENST00000623107 614 ntBASIC-2.78□□□□□ -2.85
TFF3Q07654 SNORD115-12-201ENST00000362583 82 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORD115-9-201ENST00000362912 82 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORD115-19-201ENST00000363098 82 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORD115-18-201ENST00000363293 82 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORD115-17-201ENST00000364612 82 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORD115-20-201ENST00000365099 82 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORD12C-201ENST00000386307 89 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.79□□□□□ -2.86
TFF3Q07654 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-2.79□□□□□ -2.86
TFF3Q07654 SNORA25.17-201ENST00000517184 124 ntBASIC-2.79□□□□□ -2.86
TFF3Q07654 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.8□□□□□ -2.86
TFF3Q07654 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-2.8□□□□□ -2.86
TFF3Q07654 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.8□□□□□ -2.86
TFF3Q07654 MTND3P25-201ENST00000509243 135 ntBASIC-2.8□□□□□ -2.86
TFF3Q07654 MTND1P5-201ENST00000517906 940 ntBASIC-2.8□□□□□ -2.86
TFF3Q07654 AC021451.1-201ENST00000523498 1129 ntBASIC-2.8□□□□□ -2.86
TFF3Q07654 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 SNORA27.1-201ENST00000362604 124 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 RNU6-476P-201ENST00000384726 107 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 RNU6-466P-201ENST00000391224 103 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-2.81□□□□□ -2.86
TFF3Q07654 MTND4P18-201ENST00000447010 465 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 RNY4P37-201ENST00000516225 96 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 ADI1P3-201ENST00000549509 470 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 AC055872.1-201ENST00000570978 278 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 RMST_10.1-201ENST00000616309 154 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 AC127459.3-201ENST00000624328 466 ntBASIC-2.81□□□□□ -2.86
TFF3Q07654 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.81□□□□□ -2.86
TFF3Q07654 RNU4-92P-201ENST00000363783 136 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 RNU6-194P-201ENST00000363862 105 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 SNORD87-201ENST00000364849 89 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 RNU6-245P-201ENST00000384020 107 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 RNU6-131P-201ENST00000391144 107 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-2.82□□□□□ -2.86
TFF3Q07654 SNORA25.16-201ENST00000516741 121 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 MIR3684-201ENST00000579779 74 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 AC073539.2-201ENST00000597113 165 ntBASIC-2.82□□□□□ -2.86
TFF3Q07654 SNORD14E-201ENST00000364009 85 ntBASIC-2.83□□□□□ -2.86
TFF3Q07654 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.83□□□□□ -2.86
TFF3Q07654 MIR548A2-201ENST00000384956 97 ntBASIC-2.83□□□□□ -2.86
TFF3Q07654 AL008987.1-201ENST00000415528 237 ntBASIC-2.83□□□□□ -2.86
TFF3Q07654 SNRPGP14-201ENST00000435400 219 ntBASIC-2.83□□□□□ -2.86
TFF3Q07654 RNU6-407P-201ENST00000365280 104 ntBASIC-2.84□□□□□ -2.86
TFF3Q07654 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.84□□□□□ -2.86
TFF3Q07654 AP000542.1-201ENST00000448473 371 ntBASIC-2.84□□□□□ -2.86
TFF3Q07654 SNORD2-201ENST00000459163 69 ntBASIC-2.84□□□□□ -2.86
TFF3Q07654 Y_RNA.714-201ENST00000517065 90 ntBASIC-2.84□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms