Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MTCO2P27-201ENST00000420740 428 ntBASIC-3.33□□□□□ -2.94
RPL39P62891 snoU13.6-201ENST00000458785 104 ntBASIC-3.33□□□□□ -2.94
RPL39P62891 RNU6-720P-201ENST00000516363 108 ntBASIC-3.33□□□□□ -2.94
RPL39P62891 RNU6-216P-201ENST00000363282 104 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 RNU6-400P-201ENST00000391173 106 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 AC002542.1-201ENST00000440683 193 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 AC093423.1-201ENST00000440817 142 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 AC104563.1-201ENST00000476147 376 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 Y_RNA.689-201ENST00000516589 107 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 AC069113.1-201ENST00000517763 267 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-3.34□□□□□ -2.94
RPL39P62891 AL163152.1-201ENST00000642001 374 ntBASIC-3.34□□□□□ -2.94
RPL39P62891 RNU6-1309P-201ENST00000363305 108 ntBASIC-3.35□□□□□ -2.95
RPL39P62891 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-3.35□□□□□ -2.95
RPL39P62891 MIR3139-201ENST00000579145 76 ntBASIC-3.35□□□□□ -2.95
RPL39P62891 SNORD11B-201ENST00000607707 90 ntBASIC-3.35□□□□□ -2.95
RPL39P62891 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-3.36□□□□□ -2.95
RPL39P62891 RNU6-727P-201ENST00000363592 107 ntBASIC-3.36□□□□□ -2.95
RPL39P62891 SNORD115-6-201ENST00000363942 82 ntBASIC-3.36□□□□□ -2.95
RPL39P62891 RNU5E-6P-201ENST00000365574 115 ntBASIC-3.36□□□□□ -2.95
RPL39P62891 Y_RNA.446-201ENST00000384178 104 ntBASIC-3.36□□□□□ -2.95
RPL39P62891 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-3.36□□□□□ -2.95
RPL39P62891 RNU7-136P-201ENST00000458819 69 ntBASIC-3.36□□□□□ -2.95
RPL39P62891 AL662814.1-201ENST00000617364 121 ntBASIC-3.36□□□□□ -2.95
RPL39P62891 RNA5SP405-201ENST00000363059 114 ntBASIC-3.37□□□□□ -2.95
RPL39P62891 Y_RNA.323-201ENST00000365157 109 ntBASIC-3.37□□□□□ -2.95
RPL39P62891 AC114878.1-201ENST00000441166 358 ntBASIC-3.37□□□□□ -2.95
RPL39P62891 Y_RNA.5-201ENST00000362334 102 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 Y_RNA.117-201ENST00000363294 101 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 Y_RNA.517-201ENST00000384551 106 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-3.38□□□□□ -2.95
RPL39P62891 DEFB108A-201ENST00000530110 222 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 AL049861.1-201ENST00000603130 150 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 AC023158.2-201ENST00000614876 543 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-3.38□□□□□ -2.95
RPL39P62891 SNORA62.4-201ENST00000365504 151 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 Y_RNA.432-201ENST00000384087 111 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 RNU6-278P-201ENST00000390945 109 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 RNU6-1246P-201ENST00000391064 107 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 MIR320B2-201ENST00000408479 138 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 AC018865.2-201ENST00000423631 129 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 SNORD63.1-201ENST00000516178 80 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 RNU5B-6P-201ENST00000516765 68 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 AL450270.1-201ENST00000606160 391 ntBASIC-3.39□□□□□ -2.95
RPL39P62891 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-3.39□□□□□ -2.95
RPL39P62891 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.4□□□□□ -2.95
RPL39P62891 Y_RNA.221-201ENST00000364248 96 ntBASIC-3.4□□□□□ -2.95
RPL39P62891 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.4□□□□□ -2.95
RPL39P62891 RNU6-117P-201ENST00000365415 107 ntBASIC-3.4□□□□□ -2.95
RPL39P62891 SNORA18-201ENST00000384416 132 ntBASIC-3.4□□□□□ -2.95
RPL39P62891 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-3.4□□□□□ -2.95
RPL39P62891 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-3.4□□□□□ -2.95
RPL39P62891 Y_RNA.103-201ENST00000363171 102 ntBASIC-3.41□□□□□ -2.96
RPL39P62891 RNU4-55P-201ENST00000410731 137 ntBASIC-3.41□□□□□ -2.96
RPL39P62891 MTND4P3-201ENST00000417829 541 ntBASIC-3.41□□□□□ -2.96
RPL39P62891 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-3.41□□□□□ -2.96
RPL39P62891 AC133794.1-201ENST00000602731 914 ntBASIC-3.41□□□□□ -2.96
RPL39P62891 Y_RNA.802-201ENST00000614892 130 ntBASIC-3.41□□□□□ -2.96
RPL39P62891 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-3.41□□□□□ -2.96
RPL39P62891 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-3.42□□□□□ -2.96
RPL39P62891 RNU6-252P-201ENST00000363232 107 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 RNU6-946P-201ENST00000383878 107 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 SNORA26.4-201ENST00000391188 123 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 Y_RNA.621-201ENST00000411065 96 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 AC073464.1-201ENST00000429823 534 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 RNU6-287P-201ENST00000516230 98 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 MIR4460-201ENST00000577862 86 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 AL121655.1-201ENST00000605811 308 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 AC139792.3-201ENST00000623525 224 ntBASIC-3.42□□□□□ -2.96
RPL39P62891 SNORD115-23-201ENST00000364461 82 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 RNU6-744P-201ENST00000365557 107 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 RNU6-1316P-201ENST00000384242 108 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 MIR652-201ENST00000385278 98 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 RNU6-913P-201ENST00000390913 95 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 MTCYBP8-201ENST00000422855 651 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 AL137792.2-201ENST00000443484 235 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-3.43□□□□□ -2.96
RPL39P62891 RNU7-67P-201ENST00000459003 62 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-3.43□□□□□ -2.96
RPL39P62891 MTND5P40-201ENST00000559945 246 ntBASIC-3.43□□□□□ -2.96
RPL39P62891 RNU6-194P-201ENST00000363862 105 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 SNORD14E-201ENST00000364009 85 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 SNORA20B-201ENST00000384220 132 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 RNU6-131P-201ENST00000391144 107 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 SNORD75.2-201ENST00000408784 58 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 RPL30P10-201ENST00000488148 337 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 AC117522.1-201ENST00000509821 380 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 AC008507.2-201ENST00000588402 1176 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 AL136370.1-201ENST00000608166 691 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 AP001282.2-201ENST00000616149 309 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 U4.1-201ENST00000620349 87 ntBASIC-3.44□□□□□ -2.96
RPL39P62891 RNU4-58P-201ENST00000363192 141 ntBASIC-3.45□□□□□ -2.96
RPL39P62891 MIR626-201ENST00000385032 94 ntBASIC-3.45□□□□□ -2.96
RPL39P62891 RNA5SP237-201ENST00000410414 113 ntBASIC-3.45□□□□□ -2.96
RPL39P62891 RNU2-39P-201ENST00000410604 198 ntBASIC-3.45□□□□□ -2.96
RPL39P62891 MTCO2P16-201ENST00000436962 677 ntBASIC-3.45□□□□□ -2.96
RPL39P62891 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-3.45□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 236.7 ms