Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC114755.3-201ENST00000481111 251 ntBASIC-0.72□□□□□ -2.52
VBP1P61758 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.72□□□□□ -2.52
VBP1P61758 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.72□□□□□ -2.52
VBP1P61758 CR383656.4-201ENST00000546909 122 ntBASIC-0.72□□□□□ -2.52
VBP1P61758 FTX_2.1-201ENST00000618816 94 ntBASIC-0.72□□□□□ -2.52
VBP1P61758 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 SNORD114-11-201ENST00000363738 75 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 AC108059.2-201ENST00000434626 151 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 RPS29P8-201ENST00000445109 171 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 RNU7-73P-201ENST00000458743 63 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 AC011352.1-201ENST00000512300 793 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 RNU6-966P-201ENST00000516479 104 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 RNU7-25P-201ENST00000516544 62 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 MIR4528-201ENST00000577763 90 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 MIR3672-201ENST00000584290 82 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 AC109347.2-201ENST00000610220 349 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 uc_338.36-201ENST00000622331 158 ntBASIC-0.73□□□□□ -2.53
VBP1P61758 MIR655-201ENST00000362159 97 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNA5SP245-201ENST00000364239 121 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNU6-708P-201ENST00000384217 107 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNU6-535P-201ENST00000384722 107 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 SNORD12B-201ENST00000410433 91 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.74□□□□□ -2.53
VBP1P61758 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 RNU6-436P-201ENST00000516171 114 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 MTATP6P24-201ENST00000576835 677 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 AC010205.1-201ENST00000616668 449 ntBASIC-0.74□□□□□ -2.53
VBP1P61758 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 U8.15-201ENST00000390947 134 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 AC131281.1-201ENST00000522984 164 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.75□□□□□ -2.53
VBP1P61758 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.75□□□□□ -2.53
VBP1P61758 AP001282.2-201ENST00000616149 309 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 MIR2909-201ENST00000617113 69 ntBASIC-0.75□□□□□ -2.53
VBP1P61758 RNU6-726P-201ENST00000364680 107 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 RNU6-596P-201ENST00000365395 98 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 SNORA22B-201ENST00000383876 138 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 RNU6-811P-201ENST00000384069 107 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 RNU6-842P-201ENST00000384269 107 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 SNORA32.3-201ENST00000384772 121 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 SNORD75.1-201ENST00000408373 60 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 RNU6-648P-201ENST00000410190 107 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 AC244250.2-201ENST00000418731 148 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 SNORD11.1-201ENST00000459482 85 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 AC083798.1-201ENST00000472671 131 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 RNU6-835P-201ENST00000516974 104 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 AC024405.2-202ENST00000532731 184 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 AC138749.4-201ENST00000563970 127 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.76□□□□□ -2.53
VBP1P61758 MIR5701-3-201ENST00000578890 82 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 MIR4491-201ENST00000581087 68 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 MIR5701-1-201ENST00000585138 82 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 MIR5701-2-201ENST00000615634 82 ntBASIC-0.76□□□□□ -2.53
VBP1P61758 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.76□□□□□ -2.53
VBP1P61758 SNORD115-34-201ENST00000362441 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-12-201ENST00000362583 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-29-201ENST00000362834 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-9-201ENST00000362912 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-21-201ENST00000362963 81 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-14-201ENST00000363090 81 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-13-201ENST00000363358 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-41-201ENST00000363608 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-11-201ENST00000363616 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-5-201ENST00000363633 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-39-201ENST00000363694 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-4-201ENST00000363810 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-16-201ENST00000363887 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-6-201ENST00000363942 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-42-201ENST00000364273 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-15-201ENST00000364809 81 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-1-201ENST00000364961 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-26-201ENST00000365067 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-10-201ENST00000365073 81 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-43-201ENST00000365503 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORD115-36-201ENST00000365629 82 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 SNORA75.1-201ENST00000391130 148 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 MTND4LP11-201ENST00000422184 280 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 USP9YP30-201ENST00000430729 455 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 MTND3P21-201ENST00000433774 331 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 RNU6-475P-201ENST00000516073 104 ntBASIC-0.77□□□□□ -2.53
VBP1P61758 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms