Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL445687.1-201ENST00000439946 251 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 RNU1-131P-201ENST00000458943 161 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 RNU6-158P-201ENST00000517104 100 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 AC024995.1-201ENST00000523014 93 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 MIR5009-201ENST00000578736 100 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 MIR3616-201ENST00000584070 92 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 Y_RNA.818-201ENST00000618813 71 ntBASIC2.71□□□□□ -1.98
ERVFC1P60507 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.71□□□□□ -1.98
ERVFC1P60507 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ERVFC1P60507 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ERVFC1P60507 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
ERVFC1P60507 Y_RNA.267-201ENST00000364679 109 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 RNU6-49P-201ENST00000384256 107 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 SNORA51.10-201ENST00000384418 136 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 MIR561-201ENST00000385216 97 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 RNU6-440P-201ENST00000390882 105 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 AL590004.2-201ENST00000404787 371 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 MIR548O-201ENST00000408583 114 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 AC003685.2-201ENST00000422795 395 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 AL049830.1-201ENST00000468034 425 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 CKS1BP2-201ENST00000497342 240 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 RN7SL636P-201ENST00000497504 294 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 RNY4P20-201ENST00000516678 93 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 IGKV3-31-201ENST00000523109 329 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
ERVFC1P60507 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.7□□□□□ -1.98
ERVFC1P60507 SNORA1B-201ENST00000362535 133 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RNU6-1131P-201ENST00000364955 107 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 SNORA2.2-201ENST00000365473 135 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RNU6-442P-201ENST00000383968 104 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 MIR759-201ENST00000390224 91 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RNA5SP425-201ENST00000410336 112 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RNU2-63P-201ENST00000410792 194 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RNY4P29-201ENST00000410801 97 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RN7SKP192-201ENST00000411291 327 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 SRIP3-201ENST00000413200 219 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 EDDM3CP-201ENST00000415977 425 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 RNU6-1041P-201ENST00000516254 102 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 AC068339.1-201ENST00000526965 141 ntBASIC2.69□□□□□ -1.98
ERVFC1P60507 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ERVFC1P60507 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
ERVFC1P60507 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.68□□□□□ -1.98
ERVFC1P60507 RNU6-690P-201ENST00000365242 106 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 SNORA26.2-201ENST00000390922 122 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 RN7SKP223-201ENST00000410582 62 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 AC018868.1-201ENST00000491307 315 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.68□□□□□ -1.98
ERVFC1P60507 AC023141.11-201ENST00000508864 202 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 RNU6-970P-201ENST00000516312 107 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 RNU6-830P-201ENST00000516353 107 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 MIR4648-201ENST00000580107 72 ntBASIC2.68□□□□□ -1.98
ERVFC1P60507 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
ERVFC1P60507 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
ERVFC1P60507 Y_RNA.37-201ENST00000362606 108 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 Y_RNA.99-201ENST00000363138 105 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 SNORD115-28-201ENST00000363931 81 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 RNU6-268P-201ENST00000364174 107 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 Y_RNA.298-201ENST00000364960 107 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.67□□□□□ -1.98
ERVFC1P60507 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.67□□□□□ -1.98
ERVFC1P60507 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.67□□□□□ -1.98
ERVFC1P60507 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
ERVFC1P60507 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ERVFC1P60507 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ERVFC1P60507 Y_RNA.388-201ENST00000383919 113 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 Y_RNA.440-201ENST00000384120 114 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 RNY1P6-201ENST00000384193 109 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 Y_RNA.547-201ENST00000384654 119 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 MT-TI-201ENST00000387365 69 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 MIR802-201ENST00000390235 94 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 AL359511.1-201ENST00000402970 211 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 RNU7-25P-201ENST00000516544 62 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 RNU6-667P-201ENST00000517186 102 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 AC022217.4-201ENST00000604389 163 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 AC021443.1-201ENST00000604478 211 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 AL355297.2-201ENST00000604792 129 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 MIR2052-201ENST00000636055 55 ntBASIC2.66□□□□□ -1.98
ERVFC1P60507 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
ERVFC1P60507 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
ERVFC1P60507 RNU6-414P-201ENST00000363705 104 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 SNORD14E-201ENST00000364009 85 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 SNORD114-6-201ENST00000364393 72 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 Y_RNA.336-201ENST00000365307 109 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 MIR590-201ENST00000385008 97 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.65□□□□□ -1.99
ERVFC1P60507 CST2P1-201ENST00000425770 87 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 ATP5J2P3-201ENST00000451550 258 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.65□□□□□ -1.99
ERVFC1P60507 AC084364.2-201ENST00000546924 395 ntBASIC2.65□□□□□ -1.99
ERVFC1P60507 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
ERVFC1P60507 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ERVFC1P60507 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
ERVFC1P60507 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
ERVFC1P60507 VTRNA1-1-201ENST00000363120 99 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 SNORA33-201ENST00000363664 130 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 RNU1-133P-201ENST00000364867 167 ntBASIC2.64□□□□□ -1.99
ERVFC1P60507 snoU2-30.1-201ENST00000365012 70 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms