Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNA5SP168-201ENST00000516642 112 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 AC046143.2-201ENST00000609789 160 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 AC011603.4-201ENST00000611325 277 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 TUG1_4.1-201ENST00000619464 181 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.06□□□□□ -2.08
CLRN1P58418 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CLRN1P58418 U8.1-201ENST00000362843 134 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 RNU6-424P-201ENST00000384367 105 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 MIR548O-201ENST00000408583 114 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.05□□□□□ -2.08
CLRN1P58418 HMGN2P32-201ENST00000444648 269 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 RNU7-34P-201ENST00000459394 64 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 RNU7-25P-201ENST00000516544 62 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 RNU2-19P-201ENST00000517288 84 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 AL137847.3-201ENST00000611521 109 ntBASIC2.05□□□□□ -2.08
CLRN1P58418 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLRN1P58418 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CLRN1P58418 Y_RNA.218-201ENST00000364218 104 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 Y_RNA.291-201ENST00000364886 113 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 RNU6-22P-201ENST00000384355 107 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 SNORD77.3-201ENST00000391113 65 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 SNORD23.1-201ENST00000408212 104 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 AF228730.3-201ENST00000436691 102 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 snoU13.27-201ENST00000459278 104 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 AC055731.1-201ENST00000474387 401 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 Y_RNA.686-201ENST00000516548 134 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 RNA5SP481-201ENST00000516814 122 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 RNA5SP402-201ENST00000517148 110 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
CLRN1P58418 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLRN1P58418 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
CLRN1P58418 Y_RNA.52-201ENST00000362760 96 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 MIR539-201ENST00000365690 78 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 RNU6-1292P-201ENST00000383856 107 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.03□□□□□ -2.08
CLRN1P58418 RPL23AP94-201ENST00000512518 302 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 SNORA31.17-201ENST00000516953 127 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 RNU2-60P-201ENST00000517290 128 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 MIR4709-201ENST00000577272 72 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 MIR5007-201ENST00000583098 95 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 U7.2-201ENST00000607576 63 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 AC021506.2-201ENST00000612354 169 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 AL365222.1-201ENST00000614661 98 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 AC027279.3-201ENST00000625055 122 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.03□□□□□ -2.08
CLRN1P58418 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLRN1P58418 Y_RNA.120-201ENST00000363304 110 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 Y_RNA.547-201ENST00000384654 119 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 RNA5SP508-201ENST00000411327 119 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 RNU7-12P-201ENST00000516030 62 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 RNU6-62P-201ENST00000516526 102 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 SNORA31.11-201ENST00000516528 139 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 RNU6-1234P-201ENST00000516877 103 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
CLRN1P58418 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
CLRN1P58418 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLRN1P58418 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLRN1P58418 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 Y_RNA.71-201ENST00000362892 104 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 Y_RNA.294-201ENST00000364916 102 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 SNORD18B-201ENST00000365659 72 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 RNU6-1081P-201ENST00000384537 107 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 MIR891A-201ENST00000401237 79 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.01□□□□□ -2.09
CLRN1P58418 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.01□□□□□ -2.09
CLRN1P58418 RNA5SP281-201ENST00000516504 135 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 IGLV3-17-201ENST00000519099 244 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 MIR548AI-201ENST00000579940 88 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 AC134878.1-201ENST00000619901 243 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 AC015726.2-201ENST00000620112 122 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
CLRN1P58418 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.01□□□□□ -2.09
CLRN1P58418 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CLRN1P58418 RNU6-833P-201ENST00000363486 107 ntBASIC2□□□□□ -2.09
CLRN1P58418 SNORD115-28-201ENST00000363931 81 ntBASIC2□□□□□ -2.09
CLRN1P58418 SNORA67.4-201ENST00000384688 142 ntBASIC2□□□□□ -2.09
CLRN1P58418 RNU2-51P-201ENST00000410708 197 ntBASIC2□□□□□ -2.09
CLRN1P58418 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2□□□□□ -2.09
CLRN1P58418 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
CLRN1P58418 AC099513.1-201ENST00000490423 301 ntBASIC2□□□□□ -2.09
CLRN1P58418 RNU6-479P-201ENST00000516348 105 ntBASIC2□□□□□ -2.09
CLRN1P58418 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
CLRN1P58418 MIR376A2-201ENST00000636782 80 ntBASIC2□□□□□ -2.09
CLRN1P58418 MTND5P32-201ENST00000560711 1802 ntBASIC2□□□□□ -2.09
CLRN1P58418 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLRN1P58418 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.99□□□□□ -2.09
CLRN1P58418 RNA5SP289-201ENST00000362332 137 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 Y_RNA.37-201ENST00000362606 108 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 RNU6-508P-201ENST00000363231 103 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 SNORD38C-201ENST00000384381 69 ntBASIC1.99□□□□□ -2.09
CLRN1P58418 RNU6-1154P-201ENST00000391001 104 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms