Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU6-424P-201ENST00000384367 105 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 U8.16-201ENST00000391279 133 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.66□□□□□ -2.14
HDAC4P56524 CALM2P4-201ENST00000430810 426 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.66□□□□□ -2.14
HDAC4P56524 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 SNORA4-201ENST00000584302 138 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 MIR4762-201ENST00000585261 75 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 AL021707.8-201ENST00000609428 183 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 MIR6504-201ENST00000613520 61 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 AL365265.1-201ENST00000621045 234 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 MIR8063-201ENST00000621930 81 ntBASIC1.66□□□□□ -2.14
HDAC4P56524 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
HDAC4P56524 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HDAC4P56524 RNU6-1123P-201ENST00000362347 106 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 MIR522-201ENST00000385071 87 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 SNORD11-201ENST00000459124 84 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 NDUFA4P2-201ENST00000489989 244 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.65□□□□□ -2.15
HDAC4P56524 RNU6-1116P-201ENST00000517269 99 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 BX248123.2-201ENST00000606318 124 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 ICE2P2-201ENST00000483823 2787 ntBASIC1.65□□□□□ -2.15
HDAC4P56524 snoU2_19.4-201ENST00000364329 80 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 Y_RNA.293-201ENST00000364908 93 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 MIR626-201ENST00000385032 94 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 MIR526A2-201ENST00000390198 65 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.64□□□□□ -2.15
HDAC4P56524 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.64□□□□□ -2.15
HDAC4P56524 RNY3P16-201ENST00000516338 101 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 Y_RNA.679-201ENST00000516416 91 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 RNA5SP168-201ENST00000516642 112 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.64□□□□□ -2.15
HDAC4P56524 AC078938.1-201ENST00000620993 318 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 AL513423.1-201ENST00000621695 132 ntBASIC1.64□□□□□ -2.15
HDAC4P56524 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 MIR613-201ENST00000385248 95 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 SNRPGP10-201ENST00000432323 225 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.63□□□□□ -2.15
HDAC4P56524 PGBD4P5-201ENST00000445958 426 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 RNU6-388P-201ENST00000517012 105 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 RNU6-389P-201ENST00000517048 105 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 AC009779.6-201ENST00000603972 165 ntBASIC1.63□□□□□ -2.15
HDAC4P56524 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HDAC4P56524 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HDAC4P56524 Y_RNA.24-201ENST00000362508 103 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 SNORD68-201ENST00000363214 84 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 Y_RNA.489-201ENST00000384410 101 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 MIR1276-201ENST00000408707 83 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 Y_RNA.626-201ENST00000411288 95 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 AC004965.1-201ENST00000413033 213 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 SCARNA8-201ENST00000515924 131 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 RNU4-71P-201ENST00000516258 113 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.62□□□□□ -2.15
HDAC4P56524 RPL23AP91-201ENST00000569211 455 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
HDAC4P56524 MIR302D-201ENST00000362275 68 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 SNORD50B-201ENST00000364995 70 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 MIR1323-201ENST00000408090 73 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 RPL30P13-201ENST00000418873 348 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 AC130289.1-201ENST00000577321 73 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 MIR4724-201ENST00000579485 89 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 Y_RNA.802-201ENST00000614892 130 ntBASIC1.61□□□□□ -2.15
HDAC4P56524 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HDAC4P56524 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
HDAC4P56524 Y_RNA.229-201ENST00000364347 113 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 Y_RNA.476-201ENST00000384347 108 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 SNORA8.3-201ENST00000384679 139 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 MIR513A1-201ENST00000385138 129 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 MIR660-201ENST00000385235 97 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 RNU1-78P-201ENST00000391248 165 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 AC093850.1-201ENST00000454121 251 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 RNU6-453P-201ENST00000516819 85 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 MIR4308-201ENST00000580634 81 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 AP001485.1-201ENST00000604799 199 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 SNORD3E-202ENST00000627253 216 ntBASIC1.6□□□□□ -2.15
HDAC4P56524 MIR367-201ENST00000362299 68 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 SNORD33-201ENST00000362761 85 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 Y_RNA.191-201ENST00000363972 113 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 Y_RNA.274-201ENST00000364714 101 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 RNU6-381P-201ENST00000391259 108 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 MIR1298-201ENST00000408783 112 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 MLLT10P1-201ENST00000418346 262 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 PIGPP3-201ENST00000425307 415 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 AC245047.8-201ENST00000456455 284 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 COX6CP14-201ENST00000469580 174 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.59□□□□□ -2.15
HDAC4P56524 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 AC114811.1-201ENST00000507207 168 ntBASIC1.59□□□□□ -2.15
HDAC4P56524 RNA5SP220-201ENST00000516298 104 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms