Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNORD45.3-201ENST00000363836 72 ntBASIC0.29□□□□□ -2.36
CDH6P55285 RNY1-201ENST00000364228 113 ntBASIC0.29□□□□□ -2.36
CDH6P55285 Y_RNA.279-201ENST00000364763 95 ntBASIC0.29□□□□□ -2.36
CDH6P55285 U8.7-201ENST00000364940 136 ntBASIC0.29□□□□□ -2.36
CDH6P55285 Y_RNA.331-201ENST00000365267 102 ntBASIC0.29□□□□□ -2.36
CDH6P55285 Y_RNA.376-201ENST00000365638 108 ntBASIC0.29□□□□□ -2.36
CDH6P55285 MIR613-201ENST00000385248 95 ntBASIC0.29□□□□□ -2.36
CDH6P55285 AF228730.4-201ENST00000421457 183 ntBASIC0.29□□□□□ -2.36
CDH6P55285 RNU6-830P-201ENST00000516353 107 ntBASIC0.29□□□□□ -2.36
CDH6P55285 RNU6-977P-201ENST00000516411 103 ntBASIC0.29□□□□□ -2.36
CDH6P55285 RNU7-115P-201ENST00000516433 55 ntBASIC0.29□□□□□ -2.36
CDH6P55285 MIR5188-201ENST00000583467 113 ntBASIC0.29□□□□□ -2.36
CDH6P55285 MIR4791-201ENST00000607666 84 ntBASIC0.29□□□□□ -2.36
CDH6P55285 MIR548AY-201ENST00000617669 107 ntBASIC0.29□□□□□ -2.36
CDH6P55285 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
CDH6P55285 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDH6P55285 RNU4-45P-201ENST00000365469 141 ntBASIC0.28□□□□□ -2.36
CDH6P55285 Y_RNA.537-201ENST00000384626 109 ntBASIC0.28□□□□□ -2.36
CDH6P55285 SNORD72-201ENST00000390994 80 ntBASIC0.28□□□□□ -2.36
CDH6P55285 MIR1278-201ENST00000408753 81 ntBASIC0.28□□□□□ -2.36
CDH6P55285 FCF1P9-201ENST00000412546 282 ntBASIC0.28□□□□□ -2.36
CDH6P55285 Y_RNA.653-201ENST00000459091 95 ntBASIC0.28□□□□□ -2.36
CDH6P55285 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CDH6P55285 Y_RNA.655-201ENST00000515919 96 ntBASIC0.28□□□□□ -2.36
CDH6P55285 RNU6-911P-201ENST00000516523 104 ntBASIC0.28□□□□□ -2.36
CDH6P55285 AC006600.1-201ENST00000572529 153 ntBASIC0.28□□□□□ -2.36
CDH6P55285 MIR4771-2-201ENST00000577758 74 ntBASIC0.28□□□□□ -2.36
CDH6P55285 MIR3145-201ENST00000580727 82 ntBASIC0.28□□□□□ -2.36
CDH6P55285 MIR4771-1-201ENST00000582617 74 ntBASIC0.28□□□□□ -2.36
CDH6P55285 AC008507.4-201ENST00000585464 127 ntBASIC0.28□□□□□ -2.36
CDH6P55285 AP000753.3-201ENST00000604083 169 ntBASIC0.28□□□□□ -2.36
CDH6P55285 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
CDH6P55285 AC022306.2-201ENST00000617563 647 ntBASIC0.28□□□□□ -2.36
CDH6P55285 MIR377-201ENST00000362145 69 ntBASIC0.27□□□□□ -2.37
CDH6P55285 SNORD81.2-201ENST00000365153 76 ntBASIC0.27□□□□□ -2.37
CDH6P55285 RNU6-934P-201ENST00000365154 107 ntBASIC0.27□□□□□ -2.37
CDH6P55285 RNU6-125P-201ENST00000384505 107 ntBASIC0.27□□□□□ -2.37
CDH6P55285 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.27□□□□□ -2.37
CDH6P55285 RNU6-559P-201ENST00000516151 98 ntBASIC0.27□□□□□ -2.37
CDH6P55285 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
CDH6P55285 SNORD81.1-201ENST00000363064 77 ntBASIC0.26□□□□□ -2.37
CDH6P55285 RNU4-40P-201ENST00000364351 143 ntBASIC0.26□□□□□ -2.37
CDH6P55285 MIR216A-201ENST00000385063 110 ntBASIC0.26□□□□□ -2.37
CDH6P55285 MIR559-201ENST00000385188 96 ntBASIC0.26□□□□□ -2.37
CDH6P55285 MT-TN-201ENST00000387400 73 ntBASIC0.26□□□□□ -2.37
CDH6P55285 RNU6-876P-201ENST00000391295 104 ntBASIC0.26□□□□□ -2.37
CDH6P55285 AC024067.1-201ENST00000426199 223 ntBASIC0.26□□□□□ -2.37
CDH6P55285 AC099799.1-201ENST00000439809 192 ntBASIC0.26□□□□□ -2.37
CDH6P55285 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.26□□□□□ -2.37
CDH6P55285 SCARNA8-201ENST00000515924 131 ntBASIC0.26□□□□□ -2.37
CDH6P55285 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.26□□□□□ -2.37
CDH6P55285 RPL23AP91-201ENST00000569211 455 ntBASIC0.26□□□□□ -2.37
CDH6P55285 MIR3612-201ENST00000579753 87 ntBASIC0.26□□□□□ -2.37
CDH6P55285 MIR4423-201ENST00000580922 80 ntBASIC0.26□□□□□ -2.37
CDH6P55285 AC133104.2-201ENST00000615272 193 ntBASIC0.26□□□□□ -2.37
CDH6P55285 RNU6-580P-201ENST00000365159 107 ntBASIC0.25□□□□□ -2.37
CDH6P55285 SNORA1.2-201ENST00000365189 134 ntBASIC0.25□□□□□ -2.37
CDH6P55285 RNU6-437P-201ENST00000459408 95 ntBASIC0.25□□□□□ -2.37
CDH6P55285 RNU7-110P-201ENST00000516891 62 ntBASIC0.25□□□□□ -2.37
CDH6P55285 RNU6-699P-201ENST00000517081 110 ntBASIC0.25□□□□□ -2.37
CDH6P55285 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.25□□□□□ -2.37
CDH6P55285 VN1R91P-201ENST00000594377 169 ntBASIC0.25□□□□□ -2.37
CDH6P55285 RNU6-490P-201ENST00000362985 107 ntBASIC0.24□□□□□ -2.37
CDH6P55285 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
CDH6P55285 RNU6-1048P-201ENST00000364054 107 ntBASIC0.24□□□□□ -2.37
CDH6P55285 AL603910.2-201ENST00000407268 136 ntBASIC0.24□□□□□ -2.37
CDH6P55285 RNU6-847P-201ENST00000411115 108 ntBASIC0.24□□□□□ -2.37
CDH6P55285 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.24□□□□□ -2.37
CDH6P55285 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.24□□□□□ -2.37
CDH6P55285 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.24□□□□□ -2.37
CDH6P55285 MIR2681-201ENST00000581814 105 ntBASIC0.24□□□□□ -2.37
CDH6P55285 MIR4264-201ENST00000583520 66 ntBASIC0.24□□□□□ -2.37
CDH6P55285 AL080274.1-201ENST00000605565 220 ntBASIC0.24□□□□□ -2.37
CDH6P55285 LARP7P1-201ENST00000605576 316 ntBASIC0.24□□□□□ -2.37
CDH6P55285 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
CDH6P55285 Y_RNA.474-201ENST00000384341 102 ntBASIC0.23□□□□□ -2.37
CDH6P55285 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.23□□□□□ -2.37
CDH6P55285 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.23□□□□□ -2.37
CDH6P55285 MIR4804-201ENST00000581683 73 ntBASIC0.23□□□□□ -2.37
CDH6P55285 AC113139.1-201ENST00000605049 239 ntBASIC0.23□□□□□ -2.37
CDH6P55285 AC011373.1-201ENST00000607270 237 ntBASIC0.23□□□□□ -2.37
CDH6P55285 AC006441.5-201ENST00000612680 209 ntBASIC0.23□□□□□ -2.37
CDH6P55285 uc_338.4-201ENST00000616635 176 ntBASIC0.23□□□□□ -2.37
CDH6P55285 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
CDH6P55285 MTND4LP32-201ENST00000636111 270 ntBASIC0.23□□□□□ -2.37
CDH6P55285 MT-TL1-201ENST00000386347 75 ntBASIC0.22□□□□□ -2.37
CDH6P55285 RNU4-30P-201ENST00000410245 143 ntBASIC0.22□□□□□ -2.37
CDH6P55285 SNORA36B-201ENST00000410438 131 ntBASIC0.22□□□□□ -2.37
CDH6P55285 AC090844.1-201ENST00000422019 156 ntBASIC0.22□□□□□ -2.37
CDH6P55285 FGF7P6-202ENST00000451282 293 ntBASIC0.22□□□□□ -2.37
CDH6P55285 RNU7-62P-201ENST00000458856 62 ntBASIC0.22□□□□□ -2.37
CDH6P55285 RNU7-141P-201ENST00000459304 62 ntBASIC0.22□□□□□ -2.37
CDH6P55285 RNU2-13P-201ENST00000515909 113 ntBASIC0.22□□□□□ -2.37
CDH6P55285 MIR4676-201ENST00000583078 72 ntBASIC0.22□□□□□ -2.37
CDH6P55285 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CDH6P55285 AC020891.4-201ENST00000605745 93 ntBASIC0.22□□□□□ -2.37
CDH6P55285 Y_RNA.772-201ENST00000606692 102 ntBASIC0.22□□□□□ -2.37
CDH6P55285 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.22□□□□□ -2.37
CDH6P55285 MIR4272-201ENST00000635924 64 ntBASIC0.22□□□□□ -2.37
CDH6P55285 Y_RNA.36-201ENST00000362602 112 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms