Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-830P-201ENST00000516353 107 ntBASIC0.53□□□□□ -2.32
CDH4P55283 RNU6-875P-201ENST00000516488 106 ntBASIC0.53□□□□□ -2.32
CDH4P55283 RNU11-2P-201ENST00000516898 142 ntBASIC0.53□□□□□ -2.32
CDH4P55283 Y_RNA.714-201ENST00000517065 90 ntBASIC0.53□□□□□ -2.32
CDH4P55283 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.53□□□□□ -2.32
CDH4P55283 AC011373.1-201ENST00000607270 237 ntBASIC0.53□□□□□ -2.32
CDH4P55283 AC008133.2-201ENST00000624540 351 ntBASIC0.53□□□□□ -2.32
CDH4P55283 MIR6516-201ENST00000630554 81 ntBASIC0.53□□□□□ -2.32
CDH4P55283 AL606534.2-204ENST00000635008 178 ntBASIC0.53□□□□□ -2.32
CDH4P55283 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
CDH4P55283 RNU6-937P-201ENST00000384325 106 ntBASIC0.52□□□□□ -2.33
CDH4P55283 Y_RNA.529-201ENST00000384586 119 ntBASIC0.52□□□□□ -2.33
CDH4P55283 RNU4-30P-201ENST00000410245 143 ntBASIC0.52□□□□□ -2.33
CDH4P55283 AL160004.2-201ENST00000432935 350 ntBASIC0.52□□□□□ -2.33
CDH4P55283 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.52□□□□□ -2.33
CDH4P55283 RPL23AP54-201ENST00000495129 419 ntBASIC0.52□□□□□ -2.33
CDH4P55283 RNU6-1110P-201ENST00000516462 101 ntBASIC0.52□□□□□ -2.33
CDH4P55283 RNU7-110P-201ENST00000516891 62 ntBASIC0.52□□□□□ -2.33
CDH4P55283 AC093027.1-201ENST00000546698 429 ntBASIC0.52□□□□□ -2.33
CDH4P55283 AC087685.1-201ENST00000587507 141 ntBASIC0.52□□□□□ -2.33
CDH4P55283 AL136317.1-201ENST00000612653 226 ntBASIC0.52□□□□□ -2.33
CDH4P55283 MIR548AY-201ENST00000617669 107 ntBASIC0.52□□□□□ -2.33
CDH4P55283 MIR4251-201ENST00000635819 61 ntBASIC0.52□□□□□ -2.33
CDH4P55283 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CDH4P55283 Y_RNA.39-201ENST00000362620 98 ntBASIC0.51□□□□□ -2.33
CDH4P55283 RNU6-268P-201ENST00000364174 107 ntBASIC0.51□□□□□ -2.33
CDH4P55283 RNU2-14P-201ENST00000411053 191 ntBASIC0.51□□□□□ -2.33
CDH4P55283 RNU6-130P-201ENST00000411112 103 ntBASIC0.51□□□□□ -2.33
CDH4P55283 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.51□□□□□ -2.33
CDH4P55283 AC082651.2-201ENST00000496833 166 ntBASIC0.51□□□□□ -2.33
CDH4P55283 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.51□□□□□ -2.33
CDH4P55283 Y_RNA.661-201ENST00000516003 99 ntBASIC0.51□□□□□ -2.33
CDH4P55283 AC008507.4-201ENST00000585464 127 ntBASIC0.51□□□□□ -2.33
CDH4P55283 AC007742.2-201ENST00000618226 398 ntBASIC0.51□□□□□ -2.33
CDH4P55283 Y_RNA.143-201ENST00000363520 106 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RNU6-1048P-201ENST00000364054 107 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RNU6-801P-201ENST00000364087 105 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RNU4-50P-201ENST00000364361 141 ntBASIC0.5□□□□□ -2.33
CDH4P55283 Y_RNA.286-201ENST00000364813 102 ntBASIC0.5□□□□□ -2.33
CDH4P55283 Y_RNA.315-201ENST00000365117 102 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
CDH4P55283 Y_RNA.439-201ENST00000384119 94 ntBASIC0.5□□□□□ -2.33
CDH4P55283 SNORD38C-201ENST00000384381 69 ntBASIC0.5□□□□□ -2.33
CDH4P55283 AL603910.2-201ENST00000407268 136 ntBASIC0.5□□□□□ -2.33
CDH4P55283 SNORD111-201ENST00000408139 94 ntBASIC0.5□□□□□ -2.33
CDH4P55283 MIR1278-201ENST00000408753 81 ntBASIC0.5□□□□□ -2.33
CDH4P55283 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RNU7-141P-201ENST00000459304 62 ntBASIC0.5□□□□□ -2.33
CDH4P55283 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RPS29P30-201ENST00000600975 111 ntBASIC0.5□□□□□ -2.33
CDH4P55283 PART1_1.1-201ENST00000611761 217 ntBASIC0.5□□□□□ -2.33
CDH4P55283 JPX_2.1-201ENST00000614161 69 ntBASIC0.5□□□□□ -2.33
CDH4P55283 Pinc.1-201ENST00000616452 154 ntBASIC0.5□□□□□ -2.33
CDH4P55283 AL138825.1-201ENST00000618587 192 ntBASIC0.5□□□□□ -2.33
CDH4P55283 RNU6-674P-201ENST00000363831 107 ntBASIC0.49□□□□□ -2.33
CDH4P55283 SNORD113.3-201ENST00000364630 78 ntBASIC0.49□□□□□ -2.33
CDH4P55283 Y_RNA.813-201ENST00000364639 102 ntBASIC0.49□□□□□ -2.33
CDH4P55283 Y_RNA.263-201ENST00000364659 114 ntBASIC0.49□□□□□ -2.33
CDH4P55283 Y_RNA.383-201ENST00000383855 97 ntBASIC0.49□□□□□ -2.33
CDH4P55283 RNU6-442P-201ENST00000383968 104 ntBASIC0.49□□□□□ -2.33
CDH4P55283 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
CDH4P55283 MIR570-201ENST00000384917 97 ntBASIC0.49□□□□□ -2.33
CDH4P55283 SNORD72-201ENST00000390994 80 ntBASIC0.49□□□□□ -2.33
CDH4P55283 RNU1-119P-201ENST00000391122 165 ntBASIC0.49□□□□□ -2.33
CDH4P55283 MIR936-201ENST00000401264 98 ntBASIC0.49□□□□□ -2.33
CDH4P55283 SNORA36B-201ENST00000410438 131 ntBASIC0.49□□□□□ -2.33
CDH4P55283 AC024067.1-201ENST00000426199 223 ntBASIC0.49□□□□□ -2.33
CDH4P55283 U8.20-201ENST00000459445 131 ntBASIC0.49□□□□□ -2.33
CDH4P55283 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.49□□□□□ -2.33
CDH4P55283 RNU6-507P-201ENST00000516045 100 ntBASIC0.49□□□□□ -2.33
CDH4P55283 RNU6-976P-201ENST00000516086 111 ntBASIC0.49□□□□□ -2.33
CDH4P55283 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
CDH4P55283 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.49□□□□□ -2.33
CDH4P55283 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.49□□□□□ -2.33
CDH4P55283 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
CDH4P55283 Y_RNA.58-201ENST00000362807 102 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNU4-80P-201ENST00000363200 141 ntBASIC0.48□□□□□ -2.33
CDH4P55283 Y_RNA.112-201ENST00000363250 102 ntBASIC0.48□□□□□ -2.33
CDH4P55283 Y_RNA.154-201ENST00000363624 102 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNY3P1-201ENST00000365085 102 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNY3-201ENST00000365484 102 ntBASIC0.48□□□□□ -2.33
CDH4P55283 SNORA72.4-201ENST00000384174 132 ntBASIC0.48□□□□□ -2.33
CDH4P55283 SNORA26.5-201ENST00000391215 123 ntBASIC0.48□□□□□ -2.33
CDH4P55283 U8.17-201ENST00000391292 132 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNA5SP95-201ENST00000410319 137 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNU6-613P-201ENST00000410412 108 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNA5SP222-201ENST00000411039 105 ntBASIC0.48□□□□□ -2.33
CDH4P55283 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
CDH4P55283 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.48□□□□□ -2.33
CDH4P55283 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
CDH4P55283 SNORD11-201ENST00000459124 84 ntBASIC0.48□□□□□ -2.33
CDH4P55283 RNU6-437P-201ENST00000459408 95 ntBASIC0.48□□□□□ -2.33
CDH4P55283 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
CDH4P55283 MIR4300-201ENST00000581016 96 ntBASIC0.48□□□□□ -2.33
CDH4P55283 Z83818.1-201ENST00000603584 150 ntBASIC0.48□□□□□ -2.33
CDH4P55283 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CDH4P55283 AC112487.2-201ENST00000637950 304 ntBASIC0.48□□□□□ -2.33
CDH4P55283 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CDH4P55283 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
CDH4P55283 RNU6-21P-201ENST00000384710 107 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms