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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
RNU6-830P-201
ENST00000516353
107 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
RNU6-875P-201
ENST00000516488
106 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
RNU11-2P-201
ENST00000516898
142 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
Y_RNA.714-201
ENST00000517065
90 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
AP001178.1-201
ENST00000584679
268 nt
TSL 3
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
AC011373.1-201
ENST00000607270
237 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
AC008133.2-201
ENST00000624540
351 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
MIR6516-201
ENST00000630554
81 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
AL606534.2-204
ENST00000635008
178 nt
BASIC
0.53
□□□□□ -2.32
CDH4
P55283
RNU6-654P-201
ENST00000364373
107 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
RNU6-937P-201
ENST00000384325
106 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
Y_RNA.529-201
ENST00000384586
119 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
RNU4-30P-201
ENST00000410245
143 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
AL160004.2-201
ENST00000432935
350 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
AC092755.1-201
ENST00000441746
97 nt
TSL 3
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
RPL23AP54-201
ENST00000495129
419 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
RNU6-1110P-201
ENST00000516462
101 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
RNU7-110P-201
ENST00000516891
62 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
AC093027.1-201
ENST00000546698
429 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
AC087685.1-201
ENST00000587507
141 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
AL136317.1-201
ENST00000612653
226 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
MIR548AY-201
ENST00000617669
107 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
MIR4251-201
ENST00000635819
61 nt
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
SAMD9-203
ENST00000620985
6754 nt
APPRIS P1
TSL 2
BASIC
0.52
□□□□□ -2.33
CDH4
P55283
Y_RNA.39-201
ENST00000362620
98 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
RNU6-268P-201
ENST00000364174
107 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
RNU2-14P-201
ENST00000411053
191 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
RNU6-130P-201
ENST00000411112
103 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
LINC02534-201
ENST00000446525
283 nt
TSL 3
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
AC082651.2-201
ENST00000496833
166 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
AC095059.1-201
ENST00000502570
349 nt
TSL 5
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
Y_RNA.661-201
ENST00000516003
99 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
AC008507.4-201
ENST00000585464
127 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
AC007742.2-201
ENST00000618226
398 nt
BASIC
0.51
□□□□□ -2.33
CDH4
P55283
Y_RNA.143-201
ENST00000363520
106 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RNU6-1048P-201
ENST00000364054
107 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RNU6-801P-201
ENST00000364087
105 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RNU4-50P-201
ENST00000364361
141 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
Y_RNA.286-201
ENST00000364813
102 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
Y_RNA.315-201
ENST00000365117
102 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RNU6-945P-201
ENST00000383947
107 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
Y_RNA.439-201
ENST00000384119
94 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
SNORD38C-201
ENST00000384381
69 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
AL603910.2-201
ENST00000407268
136 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
SNORD111-201
ENST00000408139
94 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
MIR1278-201
ENST00000408753
81 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
AC098934.3-201
ENST00000430450
190 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RNU7-141P-201
ENST00000459304
62 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
AC011195.1-201
ENST00000578177
177 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RPS29P30-201
ENST00000600975
111 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
PART1_1.1-201
ENST00000611761
217 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
JPX_2.1-201
ENST00000614161
69 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
Pinc.1-201
ENST00000616452
154 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
AL138825.1-201
ENST00000618587
192 nt
BASIC
0.5
□□□□□ -2.33
CDH4
P55283
RNU6-674P-201
ENST00000363831
107 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
SNORD113.3-201
ENST00000364630
78 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
Y_RNA.813-201
ENST00000364639
102 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
Y_RNA.263-201
ENST00000364659
114 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
Y_RNA.383-201
ENST00000383855
97 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
RNU6-442P-201
ENST00000383968
104 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
RNU6-1067P-201
ENST00000384752
107 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
MIR570-201
ENST00000384917
97 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
SNORD72-201
ENST00000390994
80 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
RNU1-119P-201
ENST00000391122
165 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
MIR936-201
ENST00000401264
98 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
SNORA36B-201
ENST00000410438
131 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
AC024067.1-201
ENST00000426199
223 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
U8.20-201
ENST00000459445
131 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
AC055733.2-201
ENST00000504737
340 nt
TSL 2
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
RNU6-507P-201
ENST00000516045
100 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
RNU6-976P-201
ENST00000516086
111 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
RNU6-229P-201
ENST00000516614
102 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
AC087362.2-201
ENST00000529325
256 nt
TSL 3
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
DLX6-AS1_2.1-201
ENST00000613701
207 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
HOXA11-AS1_6.1-201
ENST00000620092
179 nt
BASIC
0.49
□□□□□ -2.33
CDH4
P55283
Y_RNA.58-201
ENST00000362807
102 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNU4-80P-201
ENST00000363200
141 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
Y_RNA.112-201
ENST00000363250
102 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
Y_RNA.154-201
ENST00000363624
102 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNY3P1-201
ENST00000365085
102 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNY3-201
ENST00000365484
102 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
SNORA72.4-201
ENST00000384174
132 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
SNORA26.5-201
ENST00000391215
123 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
U8.17-201
ENST00000391292
132 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNA5SP95-201
ENST00000410319
137 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNU6-613P-201
ENST00000410412
108 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNA5SP222-201
ENST00000411039
105 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
AC114737.2-201
ENST00000421583
173 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
AC092783.1-201
ENST00000435832
231 nt
TSL 3
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
AL157398.1-201
ENST00000452981
186 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
SNORD11-201
ENST00000459124
84 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
RNU6-437P-201
ENST00000459408
95 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
AC018659.1-201
ENST00000551083
169 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
MIR4300-201
ENST00000581016
96 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
Z83818.1-201
ENST00000603584
150 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
MIR5087-201
ENST00000635826
76 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
AC112487.2-201
ENST00000637950
304 nt
BASIC
0.48
□□□□□ -2.33
CDH4
P55283
IL6ST-202
ENST00000381286
201 nt
TSL 1 (best)
BASIC
0.47
□□□□□ -2.33
CDH4
P55283
SNORA36.2-201
ENST00000384004
127 nt
BASIC
0.47
□□□□□ -2.33
CDH4
P55283
RNU6-21P-201
ENST00000384710
107 nt
BASIC
0.47
□□□□□ -2.33
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Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms