Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR216A-201ENST00000385063 110 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 SNORD115-46-201ENST00000390982 71 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 MTCO2P33-201ENST00000402100 465 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
LIMK1P53667 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 AC127455.1-201ENST00000565496 145 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 AC027335.2-201ENST00000624030 375 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 RNU6-770P-201ENST00000363929 105 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 Y_RNA.210-201ENST00000364161 110 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 RNU1-133P-201ENST00000364867 167 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 Y_RNA.336-201ENST00000365307 109 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 RNU7-141P-201ENST00000459304 62 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 RNU6-437P-201ENST00000459408 95 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 UBL5P1-201ENST00000507979 193 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 RNU6-496P-201ENST00000516145 99 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 SNORD111.1-201ENST00000516421 86 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 AC131281.1-201ENST00000522984 164 ntBASIC1.15□□□□□ -2.23
LIMK1P53667 Y_RNA.19-201ENST00000362462 99 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 RNU6-1209P-201ENST00000363655 107 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 Y_RNA.178-201ENST00000363832 102 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 RNU6-801P-201ENST00000364087 105 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 RNU6-514P-201ENST00000384208 107 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 RNU6-102P-201ENST00000384485 104 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 SNORA53-201ENST00000391141 249 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 RNU6-191P-201ENST00000516295 94 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 RNU6-1007P-201ENST00000516586 107 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 SNORA18.7-201ENST00000516910 131 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 AC044792.1-201ENST00000593294 196 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LIMK1P53667 AL356055.1-201ENST00000602528 446 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
LIMK1P53667 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LIMK1P53667 Y_RNA.222-201ENST00000364264 102 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 SNORA72.4-201ENST00000384174 132 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 MIR520C-201ENST00000385005 87 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 RNU2-14P-201ENST00000411053 191 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 RNU6-1054P-201ENST00000411293 104 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 AC245047.7-201ENST00000440265 293 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 HSPE1P25-201ENST00000455484 251 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 MRPS35P2-201ENST00000508242 191 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 RNU6-764P-201ENST00000516396 105 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 Y_RNA.701-201ENST00000516812 110 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 RPL23AP91-201ENST00000569211 455 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.13□□□□□ -2.23
LIMK1P53667 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
LIMK1P53667 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LIMK1P53667 AL391516.1-201ENST00000554380 2449 ntBASIC1.13□□□□□ -2.23
LIMK1P53667 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LIMK1P53667 Y_RNA.30-201ENST00000362572 97 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 RNA5SP457-201ENST00000363657 124 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 RNU6-899P-201ENST00000363947 107 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 Y_RNA.418-201ENST00000384029 102 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 SNORD38C-201ENST00000384381 69 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 MIR1278-201ENST00000408753 81 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 ELOCP20-201ENST00000422460 345 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
LIMK1P53667 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AC023449.1-201ENST00000454464 154 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AC098869.1-201ENST00000481627 292 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AC090142.3-201ENST00000519012 385 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AC020661.2-201ENST00000560114 134 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AL355297.3-201ENST00000604082 446 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 AL360085.1-201ENST00000604713 532 ntBASIC1.12□□□□□ -2.23
LIMK1P53667 SNORA25.1-201ENST00000362326 128 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 Y_RNA.214-201ENST00000364201 112 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 RNU6-442P-201ENST00000383968 104 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 Y_RNA.581-201ENST00000391017 97 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 SNORA26.5-201ENST00000391215 123 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.11□□□□□ -2.23
LIMK1P53667 RNU6-1143P-201ENST00000516125 104 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 RNU2-31P-201ENST00000516954 155 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 AC068700.1-201ENST00000565862 3754 ntBASIC1.11□□□□□ -2.23
LIMK1P53667 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LIMK1P53667 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 Y_RNA.11-201ENST00000362375 109 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 Y_RNA.105-201ENST00000363182 111 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 Y_RNA.136-201ENST00000363444 102 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 RNU6-1205P-201ENST00000363625 106 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 RNU6-290P-201ENST00000365212 101 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 HMGN1P33-201ENST00000432945 451 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 MTCO1P5-201ENST00000433573 344 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 MTND4LP30-201ENST00000454092 297 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.1□□□□□ -2.23
LIMK1P53667 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 AC113195.1-201ENST00000579952 141 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 MIR4680-201ENST00000580906 66 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 AC087685.1-201ENST00000587507 141 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 AL096861.1-201ENST00000610899 123 ntBASIC1.1□□□□□ -2.23
LIMK1P53667 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
LIMK1P53667 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
LIMK1P53667 RNU6-639P-201ENST00000384074 107 ntBASIC1.09□□□□□ -2.23
LIMK1P53667 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
LIMK1P53667 RNU6-763P-201ENST00000390865 106 ntBASIC1.09□□□□□ -2.23
LIMK1P53667 RNU6-121P-201ENST00000410525 99 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms