Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC109810.1-201ENST00000534066 224 ntBASIC1.28□□□□□ -2.2
HCFC1P51610 DEFB117-201ENST00000602356 141 ntBASIC1.28□□□□□ -2.2
HCFC1P51610 uc_338.4-201ENST00000616635 176 ntBASIC1.28□□□□□ -2.2
HCFC1P51610 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
HCFC1P51610 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
HCFC1P51610 Y_RNA.7-201ENST00000362352 102 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 Y_RNA.257-201ENST00000364596 102 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 SNORD48-201ENST00000364953 64 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNA5SP363-201ENST00000365072 115 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNU6-969P-201ENST00000383900 105 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNU6-1080P-201ENST00000383982 107 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 Y_RNA.552-201ENST00000384665 112 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNVU1-2-201ENST00000516326 135 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNU6-111P-201ENST00000517179 105 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RPL23AP91-201ENST00000569211 455 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 AL021707.8-201ENST00000609428 183 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 AC021506.2-201ENST00000612354 169 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 U1.36-201ENST00000620684 176 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
HCFC1P51610 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HCFC1P51610 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
HCFC1P51610 Y_RNA.242-201ENST00000364473 110 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNU6-1323P-201ENST00000384025 107 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 Y_RNA.478-201ENST00000384358 107 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 MIR194-1-201ENST00000384892 85 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 SNORA12.1-201ENST00000390873 148 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 FTH1P12-201ENST00000432137 551 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 SNORD111.1-201ENST00000516421 86 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 RNU6-197P-201ENST00000516680 100 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 MIR2681-201ENST00000581814 105 ntBASIC1.27□□□□□ -2.21
HCFC1P51610 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
HCFC1P51610 RNU6-818P-201ENST00000364837 108 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 RNU6-1318P-201ENST00000365389 103 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 PIGPP3-201ENST00000425307 415 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.26□□□□□ -2.21
HCFC1P51610 Y_RNA.644-201ENST00000459006 113 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 SNORD116-28-201ENST00000516123 91 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 Y_RNA.674-201ENST00000516362 113 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 AC027279.3-201ENST00000625055 122 ntBASIC1.26□□□□□ -2.21
HCFC1P51610 Y_RNA.297-201ENST00000364950 91 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 RNA5SP496-201ENST00000391240 109 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 SNORA79-201ENST00000408376 140 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 RNU2-64P-201ENST00000411315 191 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 SNRPGP13-201ENST00000442212 177 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 AC245047.8-201ENST00000456455 284 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 AC019176.1-201ENST00000518519 225 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 AC072026.1-201ENST00000605023 201 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 AL365434.2-201ENST00000607979 234 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.25□□□□□ -2.21
HCFC1P51610 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HCFC1P51610 AC134026.1-201ENST00000623249 2239 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HCFC1P51610 Y_RNA.8-201ENST00000362353 102 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 RNA5SP276-201ENST00000362580 94 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 RNY3P5-201ENST00000384127 102 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 MIR526A2-201ENST00000390198 65 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HCFC1P51610 Y_RNA.587-201ENST00000391210 103 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.25□□□□□ -2.21
HCFC1P51610 RNU6-126P-201ENST00000516685 103 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 RNU6-1096P-201ENST00000517089 102 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.25□□□□□ -2.21
HCFC1P51610 MIR3122-201ENST00000577243 73 ntBASIC1.25□□□□□ -2.21
HCFC1P51610 MIR126-201ENST00000362291 85 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 RNU6-833P-201ENST00000363486 107 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 Y_RNA.634-201ENST00000364811 113 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 Y_RNA.412-201ENST00000384001 104 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 RNU6-203P-201ENST00000384038 104 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 RNU6-424P-201ENST00000384367 105 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 Y_RNA.571-201ENST00000384753 98 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 MIR548A2-201ENST00000384956 97 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 HSPE1P9-201ENST00000440046 311 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 RNU2-4P-201ENST00000606190 192 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 MIR8074-201ENST00000615081 81 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 FTX_2.1-201ENST00000618816 94 ntBASIC1.24□□□□□ -2.21
HCFC1P51610 Y_RNA.23-201ENST00000362496 106 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 RNU6-200P-201ENST00000364743 107 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 RNY4P28-201ENST00000365281 93 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 RNU6-209P-201ENST00000384118 107 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 RNU6-136P-201ENST00000384663 107 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 RNU6-383P-201ENST00000410864 94 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 AC245517.4-201ENST00000448601 281 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 AC009474.2-201ENST00000451383 136 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.23□□□□□ -2.21
HCFC1P51610 SNORA28-201ENST00000606769 126 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 AL773524.1-201ENST00000614065 229 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
HCFC1P51610 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HCFC1P51610 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
HCFC1P51610 SNORD45.3-201ENST00000363836 72 ntBASIC1.23□□□□□ -2.21
HCFC1P51610 Y_RNA.354-201ENST00000365448 111 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 1229.7 ms