Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MIR6079-201ENST00000635807 62 ntBASIC1.54□□□□□ -2.16
CLK1P49759 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CLK1P49759 MIR367-201ENST00000362299 68 ntBASIC1.53□□□□□ -2.16
CLK1P49759 Y_RNA.75-201ENST00000362927 97 ntBASIC1.53□□□□□ -2.16
CLK1P49759 Y_RNA.182-201ENST00000363880 111 ntBASIC1.53□□□□□ -2.16
CLK1P49759 Y_RNA.203-201ENST00000364106 102 ntBASIC1.53□□□□□ -2.16
CLK1P49759 Y_RNA.441-201ENST00000384123 112 ntBASIC1.53□□□□□ -2.16
CLK1P49759 RNU6-939P-201ENST00000384634 107 ntBASIC1.53□□□□□ -2.16
CLK1P49759 MIR520G-201ENST00000385064 90 ntBASIC1.53□□□□□ -2.16
CLK1P49759 MT-TT-201ENST00000387460 66 ntBASIC1.53□□□□□ -2.16
CLK1P49759 AC245047.8-201ENST00000456455 284 ntBASIC1.53□□□□□ -2.16
CLK1P49759 Y_RNA.662-201ENST00000516028 97 ntBASIC1.53□□□□□ -2.16
CLK1P49759 RNU1-142P-201ENST00000516682 145 ntBASIC1.53□□□□□ -2.16
CLK1P49759 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.53□□□□□ -2.16
CLK1P49759 MIR3683-201ENST00000580847 82 ntBASIC1.53□□□□□ -2.16
CLK1P49759 AC108706.1-201ENST00000611053 297 ntBASIC1.53□□□□□ -2.16
CLK1P49759 RNU6-103P-201ENST00000363686 107 ntBASIC1.52□□□□□ -2.17
CLK1P49759 Y_RNA.796-201ENST00000364268 102 ntBASIC1.52□□□□□ -2.17
CLK1P49759 RNU6-275P-201ENST00000364910 107 ntBASIC1.52□□□□□ -2.17
CLK1P49759 Y_RNA.799-201ENST00000364992 102 ntBASIC1.52□□□□□ -2.17
CLK1P49759 RNU6-578P-201ENST00000390980 103 ntBASIC1.52□□□□□ -2.17
CLK1P49759 SNORA11.2-201ENST00000408318 127 ntBASIC1.52□□□□□ -2.17
CLK1P49759 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.52□□□□□ -2.17
CLK1P49759 RNU6-561P-201ENST00000516222 102 ntBASIC1.52□□□□□ -2.17
CLK1P49759 RNU6-1291P-201ENST00000516591 104 ntBASIC1.52□□□□□ -2.17
CLK1P49759 RNU6-341P-201ENST00000516973 96 ntBASIC1.52□□□□□ -2.17
CLK1P49759 RNA5SP437-201ENST00000517249 129 ntBASIC1.52□□□□□ -2.17
CLK1P49759 AC084364.2-201ENST00000546924 395 ntBASIC1.52□□□□□ -2.17
CLK1P49759 MIR4744-201ENST00000581563 82 ntBASIC1.52□□□□□ -2.17
CLK1P49759 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.52□□□□□ -2.17
CLK1P49759 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
CLK1P49759 Y_RNA.23-201ENST00000362496 106 ntBASIC1.51□□□□□ -2.17
CLK1P49759 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
CLK1P49759 RNU6-1080P-201ENST00000383982 107 ntBASIC1.51□□□□□ -2.17
CLK1P49759 RNA5SP323-201ENST00000391094 133 ntBASIC1.51□□□□□ -2.17
CLK1P49759 RNU6-394P-201ENST00000410735 107 ntBASIC1.51□□□□□ -2.17
CLK1P49759 RNU6-1135P-201ENST00000411083 103 ntBASIC1.51□□□□□ -2.17
CLK1P49759 AL161935.2-201ENST00000414627 60 ntBASIC1.51□□□□□ -2.17
CLK1P49759 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.51□□□□□ -2.17
CLK1P49759 SNORD11-201ENST00000459124 84 ntBASIC1.51□□□□□ -2.17
CLK1P49759 snoU13.27-201ENST00000459278 104 ntBASIC1.51□□□□□ -2.17
CLK1P49759 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
CLK1P49759 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
CLK1P49759 AC109810.1-201ENST00000534066 224 ntBASIC1.51□□□□□ -2.17
CLK1P49759 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CLK1P49759 AC019288.1-201ENST00000557918 224 ntBASIC1.51□□□□□ -2.17
CLK1P49759 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.51□□□□□ -2.17
CLK1P49759 AL365434.2-201ENST00000607979 234 ntBASIC1.51□□□□□ -2.17
CLK1P49759 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.51□□□□□ -2.17
CLK1P49759 SNORA1B-201ENST00000362535 133 ntBASIC1.5□□□□□ -2.17
CLK1P49759 RNU6-1209P-201ENST00000363655 107 ntBASIC1.5□□□□□ -2.17
CLK1P49759 RNU4-41P-201ENST00000364426 143 ntBASIC1.5□□□□□ -2.17
CLK1P49759 Y_RNA.253-201ENST00000364562 112 ntBASIC1.5□□□□□ -2.17
CLK1P49759 MIR562-201ENST00000384894 95 ntBASIC1.5□□□□□ -2.17
CLK1P49759 SNORA12.1-201ENST00000390873 148 ntBASIC1.5□□□□□ -2.17
CLK1P49759 RNA5SP109-201ENST00000391010 116 ntBASIC1.5□□□□□ -2.17
CLK1P49759 AL606845.1-201ENST00000404881 255 ntBASIC1.5□□□□□ -2.17
CLK1P49759 MIR1289-2-201ENST00000408360 111 ntBASIC1.5□□□□□ -2.17
CLK1P49759 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
CLK1P49759 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.5□□□□□ -2.17
CLK1P49759 Y_RNA.797-201ENST00000515977 94 ntBASIC1.5□□□□□ -2.17
CLK1P49759 RNU6-1007P-201ENST00000516586 107 ntBASIC1.5□□□□□ -2.17
CLK1P49759 AL358944.1-201ENST00000528537 144 ntBASIC1.5□□□□□ -2.17
CLK1P49759 AC021753.1-201ENST00000635724 168 ntBASIC1.5□□□□□ -2.17
CLK1P49759 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CLK1P49759 RNU6-312P-201ENST00000364629 107 ntBASIC1.49□□□□□ -2.17
CLK1P49759 RNU6-804P-201ENST00000384286 107 ntBASIC1.49□□□□□ -2.17
CLK1P49759 MIR504-201ENST00000385065 83 ntBASIC1.49□□□□□ -2.17
CLK1P49759 RNU6-1228P-201ENST00000391014 107 ntBASIC1.49□□□□□ -2.17
CLK1P49759 RNA5SP496-201ENST00000391240 109 ntBASIC1.49□□□□□ -2.17
CLK1P49759 AL603908.1-201ENST00000406098 201 ntBASIC1.49□□□□□ -2.17
CLK1P49759 SEPT7P4-201ENST00000437076 306 ntBASIC1.49□□□□□ -2.17
CLK1P49759 NDUFA4P2-201ENST00000489989 244 ntBASIC1.49□□□□□ -2.17
CLK1P49759 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLK1P49759 Y_RNA.170-201ENST00000363746 110 ntBASIC1.48□□□□□ -2.17
CLK1P49759 RNU4-84P-201ENST00000364200 139 ntBASIC1.48□□□□□ -2.17
CLK1P49759 Y_RNA.267-201ENST00000364679 109 ntBASIC1.48□□□□□ -2.17
CLK1P49759 RNU6-484P-201ENST00000384016 107 ntBASIC1.48□□□□□ -2.17
CLK1P49759 RNY3P5-201ENST00000384127 102 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AL627390.1-201ENST00000396055 340 ntBASIC1.48□□□□□ -2.17
CLK1P49759 SNX2P2-201ENST00000424553 323 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AC233266.1-201ENST00000454518 96 ntBASIC1.48□□□□□ -2.17
CLK1P49759 RNU7-94P-201ENST00000459576 63 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
CLK1P49759 SNORD77.4-201ENST00000516158 81 ntBASIC1.48□□□□□ -2.17
CLK1P49759 SNORA31.10-201ENST00000516482 106 ntBASIC1.48□□□□□ -2.17
CLK1P49759 MTND5P41-201ENST00000517498 206 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
CLK1P49759 RPL23AP91-201ENST00000569211 455 ntBASIC1.48□□□□□ -2.17
CLK1P49759 MIR3144-201ENST00000579460 79 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AC104465.1-201ENST00000611365 139 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AC242852.1-201ENST00000612151 96 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AL591926.4-201ENST00000616895 298 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AC244015.1-201ENST00000622301 99 ntBASIC1.48□□□□□ -2.17
CLK1P49759 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
CLK1P49759 Y_RNA.272-201ENST00000364696 102 ntBASIC1.47□□□□□ -2.17
CLK1P49759 RNU6-1130P-201ENST00000365434 107 ntBASIC1.47□□□□□ -2.17
CLK1P49759 Y_RNA.506-201ENST00000384494 102 ntBASIC1.47□□□□□ -2.17
CLK1P49759 MIR15B-201ENST00000385045 98 ntBASIC1.47□□□□□ -2.17
CLK1P49759 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms