Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MIR194-1-201ENST00000384892 85 ntBASIC1.59□□□□□ -2.15
CENPAP49450 RN7SKP101-201ENST00000411376 320 ntBASIC1.59□□□□□ -2.15
CENPAP49450 SNORD11-201ENST00000459124 84 ntBASIC1.59□□□□□ -2.15
CENPAP49450 COX6CP14-201ENST00000469580 174 ntBASIC1.59□□□□□ -2.15
CENPAP49450 NDUFA4P2-201ENST00000489989 244 ntBASIC1.59□□□□□ -2.15
CENPAP49450 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.59□□□□□ -2.15
CENPAP49450 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.59□□□□□ -2.15
CENPAP49450 AC009779.6-201ENST00000603972 165 ntBASIC1.59□□□□□ -2.15
CENPAP49450 AC106754.2-201ENST00000623006 233 ntBASIC1.59□□□□□ -2.15
CENPAP49450 RNY1-201ENST00000364228 113 ntBASIC1.58□□□□□ -2.16
CENPAP49450 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
CENPAP49450 MIR1289-2-201ENST00000408360 111 ntBASIC1.58□□□□□ -2.16
CENPAP49450 AL161935.2-201ENST00000414627 60 ntBASIC1.58□□□□□ -2.16
CENPAP49450 AL591806.2-201ENST00000433122 173 ntBASIC1.58□□□□□ -2.16
CENPAP49450 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.58□□□□□ -2.16
CENPAP49450 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
CENPAP49450 AC108210.2-201ENST00000503681 201 ntBASIC1.58□□□□□ -2.16
CENPAP49450 AC087685.1-201ENST00000587507 141 ntBASIC1.58□□□□□ -2.16
CENPAP49450 uc_338.4-201ENST00000616635 176 ntBASIC1.58□□□□□ -2.16
CENPAP49450 AC027279.3-201ENST00000625055 122 ntBASIC1.58□□□□□ -2.16
CENPAP49450 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
CENPAP49450 RNU6-833P-201ENST00000363486 107 ntBASIC1.57□□□□□ -2.16
CENPAP49450 snoU2_19.4-201ENST00000364329 80 ntBASIC1.57□□□□□ -2.16
CENPAP49450 AC130289.1-201ENST00000577321 73 ntBASIC1.57□□□□□ -2.16
CENPAP49450 MIR4422-201ENST00000581938 83 ntBASIC1.57□□□□□ -2.16
CENPAP49450 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
CENPAP49450 AC090425.1-201ENST00000610007 140 ntBASIC1.57□□□□□ -2.16
CENPAP49450 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CENPAP49450 Y_RNA.257-201ENST00000364596 102 ntBASIC1.56□□□□□ -2.16
CENPAP49450 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
CENPAP49450 MT-TT-201ENST00000387460 66 ntBASIC1.56□□□□□ -2.16
CENPAP49450 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
CENPAP49450 RNU6-381P-201ENST00000391259 108 ntBASIC1.56□□□□□ -2.16
CENPAP49450 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.56□□□□□ -2.16
CENPAP49450 HMGN2P32-201ENST00000444648 269 ntBASIC1.56□□□□□ -2.16
CENPAP49450 RN7SKP164-201ENST00000516138 266 ntBASIC1.56□□□□□ -2.16
CENPAP49450 RNU7-149P-201ENST00000516739 59 ntBASIC1.56□□□□□ -2.16
CENPAP49450 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
CENPAP49450 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.56□□□□□ -2.16
CENPAP49450 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.56□□□□□ -2.16
CENPAP49450 AL021707.8-201ENST00000609428 183 ntBASIC1.56□□□□□ -2.16
CENPAP49450 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CENPAP49450 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.55□□□□□ -2.16
CENPAP49450 MIR411-201ENST00000362239 96 ntBASIC1.55□□□□□ -2.16
CENPAP49450 RNU6-199P-201ENST00000362954 107 ntBASIC1.55□□□□□ -2.16
CENPAP49450 RNU6-457P-201ENST00000363999 107 ntBASIC1.55□□□□□ -2.16
CENPAP49450 Y_RNA.242-201ENST00000364473 110 ntBASIC1.55□□□□□ -2.16
CENPAP49450 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
CENPAP49450 RNU6-442P-201ENST00000383968 104 ntBASIC1.55□□□□□ -2.16
CENPAP49450 MIR616-201ENST00000385293 97 ntBASIC1.55□□□□□ -2.16
CENPAP49450 MIR764-201ENST00000390811 85 ntBASIC1.55□□□□□ -2.16
CENPAP49450 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
CENPAP49450 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.55□□□□□ -2.16
CENPAP49450 SCARNA8-201ENST00000515924 131 ntBASIC1.55□□□□□ -2.16
CENPAP49450 AC019176.1-201ENST00000518519 225 ntBASIC1.55□□□□□ -2.16
CENPAP49450 AC015688.6-201ENST00000577737 104 ntBASIC1.55□□□□□ -2.16
CENPAP49450 AC008507.4-201ENST00000585464 127 ntBASIC1.55□□□□□ -2.16
CENPAP49450 Pinc.1-201ENST00000616452 154 ntBASIC1.55□□□□□ -2.16
CENPAP49450 Y_RNA.297-201ENST00000364950 91 ntBASIC1.54□□□□□ -2.16
CENPAP49450 Y_RNA.336-201ENST00000365307 109 ntBASIC1.54□□□□□ -2.16
CENPAP49450 SNORD72-201ENST00000390994 80 ntBASIC1.54□□□□□ -2.16
CENPAP49450 AL606845.1-201ENST00000404881 255 ntBASIC1.54□□□□□ -2.16
CENPAP49450 RNU6-847P-201ENST00000411115 108 ntBASIC1.54□□□□□ -2.16
CENPAP49450 RPS29P11-201ENST00000496507 171 ntBASIC1.54□□□□□ -2.16
CENPAP49450 AC079140.2-201ENST00000506193 142 ntBASIC1.54□□□□□ -2.16
CENPAP49450 MIR3671-201ENST00000580455 88 ntBASIC1.54□□□□□ -2.16
CENPAP49450 RNU2-4P-201ENST00000606190 192 ntBASIC1.54□□□□□ -2.16
CENPAP49450 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
CENPAP49450 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CENPAP49450 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CENPAP49450 Y_RNA.7-201ENST00000362352 102 ntBASIC1.53□□□□□ -2.16
CENPAP49450 RNU6-1020P-201ENST00000363684 107 ntBASIC1.53□□□□□ -2.16
CENPAP49450 RNU6-103P-201ENST00000363686 107 ntBASIC1.53□□□□□ -2.16
CENPAP49450 Y_RNA.274-201ENST00000364714 101 ntBASIC1.53□□□□□ -2.16
CENPAP49450 MIR452-201ENST00000385020 85 ntBASIC1.53□□□□□ -2.16
CENPAP49450 MIR9-3-201ENST00000385084 90 ntBASIC1.53□□□□□ -2.16
CENPAP49450 Y_RNA.622-201ENST00000411091 108 ntBASIC1.53□□□□□ -2.16
CENPAP49450 AL603825.1-201ENST00000438481 80 ntBASIC1.53□□□□□ -2.16
CENPAP49450 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CENPAP49450 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.53□□□□□ -2.16
CENPAP49450 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
CENPAP49450 MIR4308-201ENST00000580634 81 ntBASIC1.53□□□□□ -2.16
CENPAP49450 Z83818.1-201ENST00000603584 150 ntBASIC1.53□□□□□ -2.16
CENPAP49450 AL391903.3-201ENST00000612158 163 ntBASIC1.53□□□□□ -2.16
CENPAP49450 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.53□□□□□ -2.16
CENPAP49450 AC084768.2-201ENST00000622736 221 ntBASIC1.53□□□□□ -2.16
CENPAP49450 MIR302D-201ENST00000362275 68 ntBASIC1.52□□□□□ -2.17
CENPAP49450 RNU6-200P-201ENST00000364743 107 ntBASIC1.52□□□□□ -2.17
CENPAP49450 SNORD1A-201ENST00000364968 72 ntBASIC1.52□□□□□ -2.17
CENPAP49450 RNU6-1318P-201ENST00000365389 103 ntBASIC1.52□□□□□ -2.17
CENPAP49450 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
CENPAP49450 RNU4-70P-201ENST00000384579 139 ntBASIC1.52□□□□□ -2.17
CENPAP49450 MIR516B2-201ENST00000385190 85 ntBASIC1.52□□□□□ -2.17
CENPAP49450 RNU6-1228P-201ENST00000391014 107 ntBASIC1.52□□□□□ -2.17
CENPAP49450 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.52□□□□□ -2.17
CENPAP49450 Y_RNA.793-201ENST00000411222 111 ntBASIC1.52□□□□□ -2.17
CENPAP49450 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.52□□□□□ -2.17
CENPAP49450 RNU6-138P-201ENST00000515952 107 ntBASIC1.52□□□□□ -2.17
CENPAP49450 Y_RNA.797-201ENST00000515977 94 ntBASIC1.52□□□□□ -2.17
CENPAP49450 SNORD77.4-201ENST00000516158 81 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms