Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 Y_RNA.217-201ENST00000364214 105 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 Y_RNA.354-201ENST00000365448 111 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 RNU6-1289P-201ENST00000384431 106 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 MIR522-201ENST00000385071 87 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 MTND3P2-201ENST00000438452 342 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 Y_RNA.641-201ENST00000459414 105 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 RPL30P7-201ENST00000479312 323 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 AC114811.1-201ENST00000507207 168 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 AC006006.1-201ENST00000603082 144 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 AL365434.2-201ENST00000607979 234 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 MIR6779-201ENST00000617283 64 ntBASIC1.77□□□□□ -2.13
TM4SF4P48230 MIR302D-201ENST00000362275 68 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 Y_RNA.54-201ENST00000362766 105 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 RNA5SP325-201ENST00000363756 130 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 Y_RNA.396-201ENST00000383949 103 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 RNU6-196P-201ENST00000384315 107 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 MT-TW-201ENST00000387382 68 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 AC027119.1-201ENST00000440877 241 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 RPL23AP91-201ENST00000569211 455 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 AP001485.1-201ENST00000604799 199 ntBASIC1.76□□□□□ -2.13
TM4SF4P48230 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.75□□□□□ -2.13
TM4SF4P48230 MIRLET7C-201ENST00000362160 84 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 Y_RNA.133-201ENST00000363428 110 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 Y_RNA.352-201ENST00000365439 102 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 MIR15B-201ENST00000385045 98 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 AC093850.1-201ENST00000454121 251 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 RPL39P38-201ENST00000467018 153 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 SNORD45.4-201ENST00000516629 73 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
TM4SF4P48230 Y_RNA.802-201ENST00000614892 130 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 MIR6515-201ENST00000619843 57 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 snoU18.1-201ENST00000629629 71 ntBASIC1.75□□□□□ -2.13
TM4SF4P48230 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TM4SF4P48230 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TM4SF4P48230 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.75□□□□□ -2.13
TM4SF4P48230 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TM4SF4P48230 RNU6-1209P-201ENST00000363655 107 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 RNU1-93P-201ENST00000364704 169 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 SNORA2.2-201ENST00000365473 135 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 Y_RNA.637-201ENST00000459424 114 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 RNU6-1116P-201ENST00000517269 99 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 AL513534.2-201ENST00000603836 250 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 AL162730.1-201ENST00000605734 292 ntBASIC1.74□□□□□ -2.13
TM4SF4P48230 Y_RNA.336-201ENST00000365307 109 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 RNU6-442P-201ENST00000383968 104 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 RNU6-211P-201ENST00000384047 107 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 RNU6-472P-201ENST00000384299 107 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 SUMO2P12-201ENST00000405924 140 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.73□□□□□ -2.13
TM4SF4P48230 AC092991.1-201ENST00000477176 376 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 AC090049.2-201ENST00000550377 109 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 AL357312.1-201ENST00000603879 298 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 U4.1-201ENST00000620349 87 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 PVT1_3.1-201ENST00000620853 95 ntBASIC1.73□□□□□ -2.13
TM4SF4P48230 RNU6-969P-201ENST00000383900 105 ntBASIC1.72□□□□□ -2.13
TM4SF4P48230 SNORA8.3-201ENST00000384679 139 ntBASIC1.72□□□□□ -2.13
TM4SF4P48230 RNA5SP496-201ENST00000391240 109 ntBASIC1.72□□□□□ -2.13
TM4SF4P48230 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.72□□□□□ -2.13
TM4SF4P48230 RNU6-922P-201ENST00000516753 99 ntBASIC1.72□□□□□ -2.13
TM4SF4P48230 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.72□□□□□ -2.13
TM4SF4P48230 AL008718.3-201ENST00000610217 321 ntBASIC1.72□□□□□ -2.13
TM4SF4P48230 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TM4SF4P48230 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.71□□□□□ -2.14
TM4SF4P48230 Y_RNA.117-201ENST00000363294 101 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 RNU6-740P-201ENST00000364734 105 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 RNU6-702P-201ENST00000364982 107 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 RNA5SP138-201ENST00000365098 114 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 SNORD38C-201ENST00000384381 69 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 RNU2-38P-201ENST00000410856 79 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.71□□□□□ -2.14
TM4SF4P48230 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.71□□□□□ -2.14
TM4SF4P48230 MIR5688-201ENST00000580619 83 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 MIR6078-201ENST00000611069 100 ntBASIC1.71□□□□□ -2.14
TM4SF4P48230 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TM4SF4P48230 RNU6-342P-201ENST00000384521 104 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 Y_RNA.518-201ENST00000384552 113 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 MIR526A2-201ENST00000390198 65 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 RPL39P39-201ENST00000455840 151 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 SNORD127-201ENST00000458892 86 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 AC012433.1-201ENST00000588916 398 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 GHRLOS.1-201ENST00000610995 70 ntBASIC1.7□□□□□ -2.14
TM4SF4P48230 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TM4SF4P48230 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.82-201ENST00000363000 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.92-201ENST00000363043 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.235-201ENST00000364412 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 SNORD50B-201ENST00000364995 70 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.306-201ENST00000365015 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.312-201ENST00000365089 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 Y_RNA.322-201ENST00000365151 102 ntBASIC1.69□□□□□ -2.14
TM4SF4P48230 MIR136-201ENST00000385207 82 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms