Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 FGF7P4-201ENST00000509595 295 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 RNU6-875P-201ENST00000516488 106 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 RNU7-43P-201ENST00000516554 64 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 Y_RNA.714-201ENST00000517065 90 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 AC109810.1-201ENST00000534066 224 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 AC093027.1-201ENST00000546698 429 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 AP003357.1-201ENST00000604497 148 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 Y_RNA.772-201ENST00000606692 102 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 AC011373.1-201ENST00000607270 237 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 SNORD58B-201ENST00000607313 66 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 Y_RNA.5-201ENST00000362334 102 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 Y_RNA.58-201ENST00000362807 102 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 Y_RNA.70-201ENST00000362886 110 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 Y_RNA.154-201ENST00000363624 102 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 SNORD14E-201ENST00000364009 85 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 RNY3P1-201ENST00000365085 102 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 RNY3-201ENST00000365484 102 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 Y_RNA.462-201ENST00000384268 102 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 MIR15B-201ENST00000385045 98 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 SNORD28B-201ENST00000390993 75 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 AL160004.2-201ENST00000432935 350 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.54□□□□□ -2.32
CXCL12P48061 FABP5P4-201ENST00000437203 171 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 RPL23AP54-201ENST00000495129 419 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.54□□□□□ -2.32
CXCL12P48061 RNU7-115P-201ENST00000516433 55 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 RNU7-116P-201ENST00000516940 62 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 MIR548AR-201ENST00000582191 57 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 RPS29P30-201ENST00000600975 111 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 AC134026.1-201ENST00000623249 2239 ntBASIC0.54□□□□□ -2.32
CXCL12P48061 Y_RNA.39-201ENST00000362620 98 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 Y_RNA.143-201ENST00000363520 106 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 RNU6-1209P-201ENST00000363655 107 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 RNA5SP48-201ENST00000363969 126 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 Y_RNA.252-201ENST00000364556 101 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 Y_RNA.356-201ENST00000365475 113 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 Y_RNA.433-201ENST00000384089 102 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 Y_RNA.551-201ENST00000384661 102 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 MIR1302-7-201ENST00000408841 72 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 NDUFA4P2-201ENST00000489989 244 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.53□□□□□ -2.32
CXCL12P48061 RNU6-507P-201ENST00000516045 100 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 AC127455.1-201ENST00000565496 145 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.53□□□□□ -2.32
CXCL12P48061 AL121655.1-201ENST00000605811 308 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 RNU6-94P-201ENST00000607728 107 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.53□□□□□ -2.32
CXCL12P48061 AL606534.2-204ENST00000635008 178 ntBASIC0.53□□□□□ -2.32
CXCL12P48061 RNU6-1048P-201ENST00000364054 107 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 Y_RNA.813-201ENST00000364639 102 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 Y_RNA.439-201ENST00000384119 94 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 MIR570-201ENST00000384917 97 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 SNORD89-201ENST00000390981 114 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 MIR1278-201ENST00000408753 81 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 RPS26P5-201ENST00000418544 335 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 AC024067.1-201ENST00000426199 223 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 HMGN1P10-201ENST00000474557 553 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 SNORA40.14-201ENST00000516543 86 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 AC036111.3-201ENST00000526389 112 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 JPX_2.1-201ENST00000614161 69 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 MIR548AY-201ENST00000617669 107 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 MIR4251-201ENST00000635819 61 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 AC112487.2-201ENST00000637950 304 ntBASIC0.52□□□□□ -2.33
CXCL12P48061 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 Y_RNA.286-201ENST00000364813 102 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 Y_RNA.315-201ENST00000365117 102 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 RNU1-115P-201ENST00000365329 160 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 RNU6-21P-201ENST00000384710 107 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 RNU2-14P-201ENST00000411053 191 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
CXCL12P48061 SNRPGP14-201ENST00000435400 219 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 AL392103.1-201ENST00000447000 198 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 MIR6516-201ENST00000630554 81 ntBASIC0.51□□□□□ -2.33
CXCL12P48061 RNU4-80P-201ENST00000363200 141 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 Y_RNA.263-201ENST00000364659 114 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 Y_RNA.383-201ENST00000383855 97 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 SNORD63-201ENST00000384262 68 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 SNORD38C-201ENST00000384381 69 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 RNU6-1009P-201ENST00000390996 107 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 RNA5SP95-201ENST00000410319 137 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 RNU6-130P-201ENST00000411112 103 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 AC236972.2-201ENST00000434979 310 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.5□□□□□ -2.33
CXCL12P48061 RNU7-141P-201ENST00000459304 62 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 U8.20-201ENST00000459445 131 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 AC004817.2-201ENST00000561794 651 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 AC012433.1-201ENST00000588916 398 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 PART1_1.1-201ENST00000611761 217 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 AL138825.1-201ENST00000618587 192 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
CXCL12P48061 RNU6-801P-201ENST00000364087 105 ntBASIC0.49□□□□□ -2.33
CXCL12P48061 RNU6-268P-201ENST00000364174 107 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms