Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 NDUFA4P2-201ENST00000489989 244 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 RNU6-1338P-201ENST00000516328 91 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 AL360085.1-201ENST00000604713 532 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 MIR8065-201ENST00000620577 100 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 snoU18.1-201ENST00000629629 71 ntBASIC1.11□□□□□ -2.23
BRCC3P46736 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
BRCC3P46736 RNU6-833P-201ENST00000363486 107 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 Y_RNA.217-201ENST00000364214 105 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 Y_RNA.237-201ENST00000364439 102 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 RNU6-472P-201ENST00000384299 107 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 Y_RNA.483-201ENST00000384380 101 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 RNU6-163P-201ENST00000384396 106 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 MIR518E-201ENST00000385252 88 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 RNU6-383P-201ENST00000410864 94 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 Y_RNA.641-201ENST00000459414 105 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 RPS29P1-201ENST00000465274 159 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 RNU7-116P-201ENST00000516940 62 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 SNORA4-201ENST00000584302 138 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 FAM106DP-201ENST00000586416 501 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 AL008718.3-201ENST00000610217 321 ntBASIC1.1□□□□□ -2.23
BRCC3P46736 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.1□□□□□ -2.23
BRCC3P46736 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.1□□□□□ -2.23
BRCC3P46736 RNU6-1272P-201ENST00000362776 107 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 Y_RNA.117-201ENST00000363294 101 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 RNU6-969P-201ENST00000383900 105 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 RNU6-1105P-201ENST00000384774 107 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 MIR568-201ENST00000385036 95 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 MIR1298-201ENST00000408783 112 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.09□□□□□ -2.23
BRCC3P46736 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.09□□□□□ -2.23
BRCC3P46736 SERF1AP1-201ENST00000514575 187 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 RNU6-1143P-201ENST00000516125 104 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 SNORD45.4-201ENST00000516629 73 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 SNORA27.4-201ENST00000516650 95 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 AC090049.2-201ENST00000550377 109 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 AL512605.2-201ENST00000592972 256 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 AC007742.2-201ENST00000618226 398 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 AC027279.3-201ENST00000625055 122 ntBASIC1.09□□□□□ -2.23
BRCC3P46736 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
BRCC3P46736 Y_RNA.145-201ENST00000363527 102 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 RNU6-674P-201ENST00000363831 107 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 RNU4-10P-201ENST00000364383 140 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 Y_RNA.396-201ENST00000383949 103 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 Y_RNA.574-201ENST00000384766 95 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 MIR516B2-201ENST00000385190 85 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 MIR891A-201ENST00000401237 79 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 MTND2P23-201ENST00000422990 651 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 AL358176.2-201ENST00000425769 204 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 RNU6-437P-201ENST00000459408 95 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 TRBVB-201ENST00000477100 408 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 CYCTP-201ENST00000504253 315 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 AL442663.2-201ENST00000554385 511 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 AL117187.1-201ENST00000555482 181 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 AC013791.1-201ENST00000616619 62 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 MIR8062-201ENST00000621515 85 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
BRCC3P46736 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRCC3P46736 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
BRCC3P46736 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRCC3P46736 Y_RNA.118-201ENST00000363300 101 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 Y_RNA.122-201ENST00000363331 96 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 Y_RNA.459-201ENST00000384251 102 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 Y_RNA.572-201ENST00000384757 98 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 SNORD72-201ENST00000390994 80 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 RNU6-1248P-201ENST00000391096 64 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 AL078595.1-201ENST00000404458 226 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 BTF3P11-201ENST00000426582 477 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 AC090142.3-201ENST00000519012 385 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 RPL23AP91-201ENST00000569211 455 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 MIR7111-201ENST00000619751 72 ntBASIC1.07□□□□□ -2.24
BRCC3P46736 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRCC3P46736 SNORA25.1-201ENST00000362326 128 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNU6-1084P-201ENST00000362498 107 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 Y_RNA.47-201ENST00000362697 108 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNU6-1309P-201ENST00000363305 108 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 Y_RNA.133-201ENST00000363428 110 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNU6-899P-201ENST00000363947 107 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNU6-740P-201ENST00000364734 105 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 SNORA2.2-201ENST00000365473 135 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 SNORA53-201ENST00000391141 249 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNU6-131P-201ENST00000391144 107 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 AL603910.2-201ENST00000407268 136 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 SNORD11-201ENST00000459124 84 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 RNU6-327P-201ENST00000516270 127 ntBASIC1.06□□□□□ -2.24
BRCC3P46736 MIR5692C2-201ENST00000577959 77 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms