Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 Y_RNA.368-201ENST00000365547 113 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 SNORD72-201ENST00000390994 80 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.57□□□□□ -2.32
TNFSF9P41273 AL035398.1-201ENST00000430869 322 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 SNRPGP14-201ENST00000435400 219 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 AC092628.1-201ENST00000436250 252 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 AC099799.1-201ENST00000439809 192 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.57□□□□□ -2.32
TNFSF9P41273 MIR548AR-201ENST00000582191 57 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 AC010205.1-201ENST00000616668 449 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 uc_338.22-201ENST00000622722 187 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 AC027279.3-201ENST00000625055 122 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 AL606534.2-204ENST00000635008 178 ntBASIC0.57□□□□□ -2.32
TNFSF9P41273 RNA5SP264-201ENST00000363115 107 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RNU6-1209P-201ENST00000363655 107 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 Y_RNA.252-201ENST00000364556 101 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 AC117470.1-201ENST00000381974 330 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 Y_RNA.418-201ENST00000384029 102 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 AL603910.2-201ENST00000407268 136 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RNU6-121P-201ENST00000410525 99 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.56□□□□□ -2.32
TNFSF9P41273 MTND5P20-201ENST00000448677 143 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 SNORD123-201ENST00000459473 70 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RNU6-496P-201ENST00000516145 99 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RNU6-911P-201ENST00000516523 104 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RNU7-110P-201ENST00000516891 62 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 SNORA74.3-201ENST00000517108 154 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 MIR4764-201ENST00000580680 88 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 MIR4801-201ENST00000582704 82 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 POLR3GP1-201ENST00000594073 261 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RBM11P1-201ENST00000604951 799 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 RNU6-94P-201ENST00000607728 107 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
TNFSF9P41273 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TNFSF9P41273 RNU6-1084P-201ENST00000362498 107 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 Y_RNA.230-201ENST00000364348 109 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 RNU6-806P-201ENST00000365147 105 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 SNORA72-201ENST00000384339 132 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 Y_RNA.494-201ENST00000384432 111 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 RNU6-110P-201ENST00000384508 104 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 Y_RNA.551-201ENST00000384661 102 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 PMCHL1-202ENST00000423102 261 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.55□□□□□ -2.32
TNFSF9P41273 AC005042.3-201ENST00000453230 174 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 U8.19-201ENST00000459095 133 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 snoU13.21-201ENST00000459368 105 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 MTND3P22-201ENST00000510932 243 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 SNORA70.12-201ENST00000516084 153 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 RNU7-115P-201ENST00000516433 55 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 Y_RNA.702-201ENST00000516843 96 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 AC131055.1-201ENST00000584626 316 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 AC012433.1-201ENST00000588916 398 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 AC104695.3-201ENST00000604052 296 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 AL080274.1-201ENST00000605565 220 ntBASIC0.55□□□□□ -2.32
TNFSF9P41273 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
TNFSF9P41273 Y_RNA.197-201ENST00000364004 102 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 Y_RNA.216-201ENST00000364205 93 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 Y_RNA.383-201ENST00000383855 97 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 RNU6-474P-201ENST00000384243 107 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 Y_RNA.471-201ENST00000384312 102 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 MIR215-201ENST00000384858 110 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 MIR520C-201ENST00000385005 87 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 RNU6-1009P-201ENST00000390996 107 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 AC015818.7-201ENST00000428754 109 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 AC087499.7-201ENST00000441958 109 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 MTND4P19-201ENST00000446659 478 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 SUMO1P2-201ENST00000452524 304 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 RNU7-141P-201ENST00000459304 62 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 HMGN1P10-201ENST00000474557 553 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 RPL23AP54-201ENST00000495129 419 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 RNU7-181P-201ENST00000517234 74 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 AC040926.1-201ENST00000530195 238 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 RAC1P9-201ENST00000604990 392 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.54□□□□□ -2.32
TNFSF9P41273 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
TNFSF9P41273 MIR103A2-201ENST00000362154 78 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 Y_RNA.203-201ENST00000364106 102 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 RNU4-50P-201ENST00000364361 141 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 RNU6-1323P-201ENST00000384025 107 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 Y_RNA.509-201ENST00000384506 99 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 MIR452-201ENST00000385020 85 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 RNU6-131P-201ENST00000391144 107 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 RNU6-383P-201ENST00000410864 94 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC090844.1-201ENST00000422019 156 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 HSPE1P25-201ENST00000455484 251 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.53□□□□□ -2.32
TNFSF9P41273 MRPS35P2-201ENST00000508242 191 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC036111.3-201ENST00000526389 112 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC109810.1-201ENST00000534066 224 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC127455.1-201ENST00000565496 145 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC005357.1-201ENST00000588399 301 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AP003357.1-201ENST00000604497 148 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 AC011373.1-201ENST00000607270 237 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 7SK.10-201ENST00000621414 298 ntBASIC0.53□□□□□ -2.32
TNFSF9P41273 MIR6516-201ENST00000630554 81 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms