Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 DNAJC19P9-201ENST00000555084 351 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HNF4AP41235 Y_RNA.24-201ENST00000362508 103 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 RNU6-674P-201ENST00000363831 107 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 Y_RNA.203-201ENST00000364106 102 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 RNU6-1318P-201ENST00000365389 103 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 MIR626-201ENST00000385032 94 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 MIR1298-201ENST00000408783 112 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
HNF4AP41235 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.4□□□□□ -2.19
HNF4AP41235 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 AC100767.1-201ENST00000528178 123 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.4□□□□□ -2.19
HNF4AP41235 AL512310.8-201ENST00000550183 120 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 AL591926.4-201ENST00000616895 298 ntBASIC1.4□□□□□ -2.19
HNF4AP41235 RNU6-1209P-201ENST00000363655 107 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.199-201ENST00000364014 102 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.200-201ENST00000364018 102 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.796-201ENST00000364268 102 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.253-201ENST00000364562 112 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.274-201ENST00000364714 101 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.799-201ENST00000364992 102 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 RNU6-969P-201ENST00000383900 105 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 MIR562-201ENST00000384894 95 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.39□□□□□ -2.19
HNF4AP41235 OR9P1P-201ENST00000496431 281 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.39□□□□□ -2.19
HNF4AP41235 RNU2-56P-201ENST00000516826 190 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 CYP3A52P-201ENST00000563326 91 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.802-201ENST00000614892 130 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
HNF4AP41235 Y_RNA.83-201ENST00000363005 113 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 snoU2_19.4-201ENST00000364329 80 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 Y_RNA.262-201ENST00000364641 102 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 Y_RNA.265-201ENST00000364677 108 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 Y_RNA.308-201ENST00000365043 101 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 Y_RNA.515-201ENST00000384535 112 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 SNORA8.3-201ENST00000384679 139 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 RNU6-1031P-201ENST00000384773 107 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 MIR526A2-201ENST00000390198 65 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 RNU4-62P-201ENST00000410125 130 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 RN7SKP200-201ENST00000410564 320 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
HNF4AP41235 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 AC108059.2-201ENST00000434626 151 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 STAG3L5P-204ENST00000443759 179 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 COX6CP14-201ENST00000469580 174 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 SCARNA8-201ENST00000515924 131 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 MIR4724-201ENST00000579485 89 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 AC021506.2-201ENST00000612354 169 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 MIR8065-201ENST00000620577 100 ntBASIC1.38□□□□□ -2.19
HNF4AP41235 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.38□□□□□ -2.19
HNF4AP41235 RNU6-923P-201ENST00000364753 107 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 RNU6-493P-201ENST00000391321 108 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.37□□□□□ -2.19
HNF4AP41235 HMGN1P7-201ENST00000491722 313 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 RNU6-138P-201ENST00000515952 107 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 RNU6-453P-201ENST00000516819 85 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 RNU6-794P-201ENST00000517261 64 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 RPL23AP91-201ENST00000569211 455 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 MIR4308-201ENST00000580634 81 ntBASIC1.37□□□□□ -2.19
HNF4AP41235 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HNF4AP41235 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HNF4AP41235 MIRLET7C-201ENST00000362160 84 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 MIR411-201ENST00000362239 96 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 SNORD68-201ENST00000363214 84 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RNU6-200P-201ENST00000364743 107 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RNU6-47P-201ENST00000383866 107 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 MIR522-201ENST00000385071 87 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 MT-TT-201ENST00000387460 66 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RNA5SP482-201ENST00000391269 118 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RNU6-847P-201ENST00000411115 108 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 MLLT10P1-201ENST00000418346 262 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 CALM2P4-201ENST00000430810 426 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 SNRPGP10-201ENST00000432323 225 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 PGBD4P5-201ENST00000445958 426 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 NDUFA4P2-201ENST00000489989 244 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RNU7-28P-201ENST00000516759 62 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 RNU6-1116P-201ENST00000517269 99 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 MIR4769-201ENST00000584126 77 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
HNF4AP41235 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
HNF4AP41235 MIR367-201ENST00000362299 68 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 Y_RNA.229-201ENST00000364347 113 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 Y_RNA.297-201ENST00000364950 91 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HNF4AP41235 RNU6-381P-201ENST00000391259 108 ntBASIC1.35□□□□□ -2.19
HNF4AP41235 U8.16-201ENST00000391279 133 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms