Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RNU6-708P-201ENST00000384217 107 ntBASIC0.35□□□□□ -2.35
MDH1P40925 RNU6-876P-201ENST00000391295 104 ntBASIC0.35□□□□□ -2.35
MDH1P40925 PDCL2P1-201ENST00000419302 352 ntBASIC0.35□□□□□ -2.35
MDH1P40925 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
MDH1P40925 RNU6-1132P-201ENST00000459214 107 ntBASIC0.35□□□□□ -2.35
MDH1P40925 NDUFA4P2-201ENST00000489989 244 ntBASIC0.35□□□□□ -2.35
MDH1P40925 AC006600.1-201ENST00000572529 153 ntBASIC0.35□□□□□ -2.35
MDH1P40925 DEFB117-201ENST00000602356 141 ntBASIC0.35□□□□□ -2.35
MDH1P40925 AC011373.1-201ENST00000607270 237 ntBASIC0.35□□□□□ -2.35
MDH1P40925 AC022709.1-201ENST00000615967 87 ntBASIC0.35□□□□□ -2.35
MDH1P40925 AC138305.3-201ENST00000624988 240 ntBASIC0.35□□□□□ -2.35
MDH1P40925 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
MDH1P40925 AC090625.1-201ENST00000357130 210 ntBASIC0.34□□□□□ -2.36
MDH1P40925 RNU6-580P-201ENST00000365159 107 ntBASIC0.34□□□□□ -2.36
MDH1P40925 AC096644.2-201ENST00000429278 159 ntBASIC0.34□□□□□ -2.36
MDH1P40925 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.34□□□□□ -2.36
MDH1P40925 MTCO3P10-201ENST00000455912 772 ntBASIC0.34□□□□□ -2.36
MDH1P40925 RNU6-437P-201ENST00000459408 95 ntBASIC0.34□□□□□ -2.36
MDH1P40925 AC107297.1-201ENST00000459991 176 ntBASIC0.34□□□□□ -2.36
MDH1P40925 MIR4423-201ENST00000580922 80 ntBASIC0.34□□□□□ -2.36
MDH1P40925 MIR4264-201ENST00000583520 66 ntBASIC0.34□□□□□ -2.36
MDH1P40925 uc_338.4-201ENST00000616635 176 ntBASIC0.34□□□□□ -2.36
MDH1P40925 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
MDH1P40925 Y_RNA.122-201ENST00000363331 96 ntBASIC0.33□□□□□ -2.36
MDH1P40925 SNORD81.2-201ENST00000365153 76 ntBASIC0.33□□□□□ -2.36
MDH1P40925 Y_RNA.354-201ENST00000365448 111 ntBASIC0.33□□□□□ -2.36
MDH1P40925 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
MDH1P40925 AF228730.4-201ENST00000421457 183 ntBASIC0.33□□□□□ -2.36
MDH1P40925 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
MDH1P40925 RNA5SP436-201ENST00000516020 115 ntBASIC0.33□□□□□ -2.36
MDH1P40925 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
MDH1P40925 RNU7-110P-201ENST00000516891 62 ntBASIC0.33□□□□□ -2.36
MDH1P40925 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
MDH1P40925 AC006441.5-201ENST00000612680 209 ntBASIC0.33□□□□□ -2.36
MDH1P40925 AC010205.1-201ENST00000616668 449 ntBASIC0.33□□□□□ -2.36
MDH1P40925 RNU6-205P-201ENST00000390858 107 ntBASIC0.32□□□□□ -2.36
MDH1P40925 MIR936-201ENST00000401264 98 ntBASIC0.32□□□□□ -2.36
MDH1P40925 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
MDH1P40925 RNU6-496P-201ENST00000516145 99 ntBASIC0.32□□□□□ -2.36
MDH1P40925 RPL23AP91-201ENST00000569211 455 ntBASIC0.32□□□□□ -2.36
MDH1P40925 MIR4771-2-201ENST00000577758 74 ntBASIC0.32□□□□□ -2.36
MDH1P40925 MIR4771-1-201ENST00000582617 74 ntBASIC0.32□□□□□ -2.36
MDH1P40925 AC022306.2-201ENST00000617563 647 ntBASIC0.32□□□□□ -2.36
MDH1P40925 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
MDH1P40925 MIR18A-201ENST00000362310 71 ntBASIC0.31□□□□□ -2.36
MDH1P40925 RNU6-369P-201ENST00000362515 102 ntBASIC0.31□□□□□ -2.36
MDH1P40925 RNU6-674P-201ENST00000363831 107 ntBASIC0.31□□□□□ -2.36
MDH1P40925 Y_RNA.428-201ENST00000384078 102 ntBASIC0.31□□□□□ -2.36
MDH1P40925 MT-TL1-201ENST00000386347 75 ntBASIC0.31□□□□□ -2.36
MDH1P40925 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.31□□□□□ -2.36
MDH1P40925 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
MDH1P40925 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
MDH1P40925 MIR3612-201ENST00000579753 87 ntBASIC0.31□□□□□ -2.36
MDH1P40925 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
MDH1P40925 Y_RNA.259-201ENST00000364619 101 ntBASIC0.3□□□□□ -2.36
MDH1P40925 MIR559-201ENST00000385188 96 ntBASIC0.3□□□□□ -2.36
MDH1P40925 RNU6-1248P-201ENST00000391096 64 ntBASIC0.3□□□□□ -2.36
MDH1P40925 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.3□□□□□ -2.36
MDH1P40925 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.3□□□□□ -2.36
MDH1P40925 SNORA36B-201ENST00000410438 131 ntBASIC0.3□□□□□ -2.36
MDH1P40925 SNORD83.1-201ENST00000411362 77 ntBASIC0.3□□□□□ -2.36
MDH1P40925 AC023449.1-201ENST00000454464 154 ntBASIC0.3□□□□□ -2.36
MDH1P40925 RNU6-699P-201ENST00000517081 110 ntBASIC0.3□□□□□ -2.36
MDH1P40925 RPS29P30-201ENST00000600975 111 ntBASIC0.3□□□□□ -2.36
MDH1P40925 U6atac.1-201ENST00000616025 117 ntBASIC0.3□□□□□ -2.36
MDH1P40925 AL138825.1-201ENST00000618587 192 ntBASIC0.3□□□□□ -2.36
MDH1P40925 MIR6515-201ENST00000619843 57 ntBASIC0.3□□□□□ -2.36
MDH1P40925 AC092634.7-201ENST00000621022 103 ntBASIC0.3□□□□□ -2.36
MDH1P40925 SNORD45.3-201ENST00000363836 72 ntBASIC0.29□□□□□ -2.36
MDH1P40925 RNU6-21P-201ENST00000384710 107 ntBASIC0.29□□□□□ -2.36
MDH1P40925 MIR216A-201ENST00000385063 110 ntBASIC0.29□□□□□ -2.36
MDH1P40925 SNORD72-201ENST00000390994 80 ntBASIC0.29□□□□□ -2.36
MDH1P40925 snoU13.16-201ENST00000459350 104 ntBASIC0.29□□□□□ -2.36
MDH1P40925 snoU13.21-201ENST00000459368 105 ntBASIC0.29□□□□□ -2.36
MDH1P40925 SNORD116.3-201ENST00000517176 78 ntBASIC0.29□□□□□ -2.36
MDH1P40925 SNORD81.1-201ENST00000363064 77 ntBASIC0.28□□□□□ -2.36
MDH1P40925 SNORA63C-201ENST00000364578 129 ntBASIC0.28□□□□□ -2.36
MDH1P40925 RNU6-1040P-201ENST00000383974 107 ntBASIC0.28□□□□□ -2.36
MDH1P40925 RNA5SP193-201ENST00000410353 107 ntBASIC0.28□□□□□ -2.36
MDH1P40925 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.28□□□□□ -2.36
MDH1P40925 RNU2-13P-201ENST00000515909 113 ntBASIC0.28□□□□□ -2.36
MDH1P40925 Y_RNA.713-201ENST00000517013 96 ntBASIC0.28□□□□□ -2.36
MDH1P40925 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.28□□□□□ -2.36
MDH1P40925 MIR4804-201ENST00000581683 73 ntBASIC0.28□□□□□ -2.36
MDH1P40925 AL355297.3-201ENST00000604082 446 ntBASIC0.28□□□□□ -2.36
MDH1P40925 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
MDH1P40925 Y_RNA.269-201ENST00000364685 89 ntBASIC0.27□□□□□ -2.37
MDH1P40925 Y_RNA.474-201ENST00000384341 102 ntBASIC0.27□□□□□ -2.37
MDH1P40925 RNU6-125P-201ENST00000384505 107 ntBASIC0.27□□□□□ -2.37
MDH1P40925 MIR1278-201ENST00000408753 81 ntBASIC0.27□□□□□ -2.37
MDH1P40925 RNU7-141P-201ENST00000459304 62 ntBASIC0.27□□□□□ -2.37
MDH1P40925 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.27□□□□□ -2.37
MDH1P40925 MIR4676-201ENST00000583078 72 ntBASIC0.27□□□□□ -2.37
MDH1P40925 AL121655.1-201ENST00000605811 308 ntBASIC0.27□□□□□ -2.37
MDH1P40925 MIR4272-201ENST00000635924 64 ntBASIC0.27□□□□□ -2.37
MDH1P40925 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
MDH1P40925 Y_RNA.355-201ENST00000365462 98 ntBASIC0.26□□□□□ -2.37
MDH1P40925 Y_RNA.387-201ENST00000383918 102 ntBASIC0.26□□□□□ -2.37
MDH1P40925 AL603910.2-201ENST00000407268 136 ntBASIC0.26□□□□□ -2.37
MDH1P40925 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms