Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL035398.1-201ENST00000430869 322 ntBASIC0.66□□□□□ -2.3
RFC4P35249 FABP5P4-201ENST00000437203 171 ntBASIC0.66□□□□□ -2.3
RFC4P35249 RPL23AP54-201ENST00000495129 419 ntBASIC0.66□□□□□ -2.3
RFC4P35249 RN7SKP164-201ENST00000516138 266 ntBASIC0.66□□□□□ -2.3
RFC4P35249 Y_RNA.714-201ENST00000517065 90 ntBASIC0.66□□□□□ -2.3
RFC4P35249 AC093027.1-201ENST00000546698 429 ntBASIC0.66□□□□□ -2.3
RFC4P35249 MIR548AR-201ENST00000582191 57 ntBASIC0.66□□□□□ -2.3
RFC4P35249 RPS29P30-201ENST00000600975 111 ntBASIC0.66□□□□□ -2.3
RFC4P35249 AC011373.1-201ENST00000607270 237 ntBASIC0.66□□□□□ -2.3
RFC4P35249 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.66□□□□□ -2.3
RFC4P35249 AC010205.1-201ENST00000616668 449 ntBASIC0.66□□□□□ -2.3
RFC4P35249 Y_RNA.58-201ENST00000362807 102 ntBASIC0.65□□□□□ -2.31
RFC4P35249 Y_RNA.154-201ENST00000363624 102 ntBASIC0.65□□□□□ -2.31
RFC4P35249 RNY3P1-201ENST00000365085 102 ntBASIC0.65□□□□□ -2.31
RFC4P35249 Y_RNA.356-201ENST00000365475 113 ntBASIC0.65□□□□□ -2.31
RFC4P35249 RNY3-201ENST00000365484 102 ntBASIC0.65□□□□□ -2.31
RFC4P35249 SNORD89-201ENST00000390981 114 ntBASIC0.65□□□□□ -2.31
RFC4P35249 SNORD28B-201ENST00000390993 75 ntBASIC0.65□□□□□ -2.31
RFC4P35249 MIR1278-201ENST00000408753 81 ntBASIC0.65□□□□□ -2.31
RFC4P35249 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
RFC4P35249 HMGN2P32-201ENST00000444648 269 ntBASIC0.65□□□□□ -2.31
RFC4P35249 RNU7-152P-201ENST00000458982 64 ntBASIC0.65□□□□□ -2.31
RFC4P35249 U8.19-201ENST00000459095 133 ntBASIC0.65□□□□□ -2.31
RFC4P35249 SNORD19B-201ENST00000459623 84 ntBASIC0.65□□□□□ -2.31
RFC4P35249 RNU6-507P-201ENST00000516045 100 ntBASIC0.65□□□□□ -2.31
RFC4P35249 RNU6-875P-201ENST00000516488 106 ntBASIC0.65□□□□□ -2.31
RFC4P35249 RNU7-43P-201ENST00000516554 64 ntBASIC0.65□□□□□ -2.31
RFC4P35249 SNORD58B-201ENST00000607313 66 ntBASIC0.65□□□□□ -2.31
RFC4P35249 AC134026.1-201ENST00000623249 2239 ntBASIC0.64□□□□□ -2.31
RFC4P35249 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RFC4P35249 Y_RNA.5-201ENST00000362334 102 ntBASIC0.64□□□□□ -2.31
RFC4P35249 Y_RNA.143-201ENST00000363520 106 ntBASIC0.64□□□□□ -2.31
RFC4P35249 RNU6-1209P-201ENST00000363655 107 ntBASIC0.64□□□□□ -2.31
RFC4P35249 SNORD14E-201ENST00000364009 85 ntBASIC0.64□□□□□ -2.31
RFC4P35249 RNU6-1048P-201ENST00000364054 107 ntBASIC0.64□□□□□ -2.31
RFC4P35249 Y_RNA.813-201ENST00000364639 102 ntBASIC0.64□□□□□ -2.31
RFC4P35249 Y_RNA.456-201ENST00000384232 111 ntBASIC0.64□□□□□ -2.31
RFC4P35249 Y_RNA.462-201ENST00000384268 102 ntBASIC0.64□□□□□ -2.31
RFC4P35249 MIR570-201ENST00000384917 97 ntBASIC0.64□□□□□ -2.31
RFC4P35249 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
RFC4P35249 AC114737.2-201ENST00000421583 173 ntBASIC0.64□□□□□ -2.31
RFC4P35249 AL160004.2-201ENST00000432935 350 ntBASIC0.64□□□□□ -2.31
RFC4P35249 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.64□□□□□ -2.31
RFC4P35249 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.64□□□□□ -2.31
RFC4P35249 RNU7-115P-201ENST00000516433 55 ntBASIC0.64□□□□□ -2.31
RFC4P35249 RNU7-116P-201ENST00000516940 62 ntBASIC0.64□□□□□ -2.31
RFC4P35249 AP003357.1-201ENST00000604497 148 ntBASIC0.64□□□□□ -2.31
RFC4P35249 RNU6-94P-201ENST00000607728 107 ntBASIC0.64□□□□□ -2.31
RFC4P35249 AC122108.2-201ENST00000611946 526 ntBASIC0.64□□□□□ -2.31
RFC4P35249 JPX_2.1-201ENST00000614161 69 ntBASIC0.64□□□□□ -2.31
RFC4P35249 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RFC4P35249 Y_RNA.39-201ENST00000362620 98 ntBASIC0.63□□□□□ -2.31
RFC4P35249 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
RFC4P35249 MIR15B-201ENST00000385045 98 ntBASIC0.63□□□□□ -2.31
RFC4P35249 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.63□□□□□ -2.31
RFC4P35249 NDUFA4P2-201ENST00000489989 244 ntBASIC0.63□□□□□ -2.31
RFC4P35249 AC036111.3-201ENST00000526389 112 ntBASIC0.63□□□□□ -2.31
RFC4P35249 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.63□□□□□ -2.31
RFC4P35249 AC012433.1-201ENST00000588916 398 ntBASIC0.63□□□□□ -2.31
RFC4P35249 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.63□□□□□ -2.31
RFC4P35249 AL606534.2-204ENST00000635008 178 ntBASIC0.63□□□□□ -2.31
RFC4P35249 MIR4251-201ENST00000635819 61 ntBASIC0.63□□□□□ -2.31
RFC4P35249 VTRNA1-3-201ENST00000365645 89 ntBASIC0.62□□□□□ -2.31
RFC4P35249 MIR1302-7-201ENST00000408841 72 ntBASIC0.62□□□□□ -2.31
RFC4P35249 RNU2-14P-201ENST00000411053 191 ntBASIC0.62□□□□□ -2.31
RFC4P35249 AC024067.1-201ENST00000426199 223 ntBASIC0.62□□□□□ -2.31
RFC4P35249 HMGN1P10-201ENST00000474557 553 ntBASIC0.62□□□□□ -2.31
RFC4P35249 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
RFC4P35249 FGF7P4-201ENST00000509595 295 ntBASIC0.62□□□□□ -2.31
RFC4P35249 AC127455.1-201ENST00000565496 145 ntBASIC0.62□□□□□ -2.31
RFC4P35249 AL353765.1-201ENST00000605514 183 ntBASIC0.62□□□□□ -2.31
RFC4P35249 AL121655.1-201ENST00000605811 308 ntBASIC0.62□□□□□ -2.31
RFC4P35249 MIR548AY-201ENST00000617669 107 ntBASIC0.62□□□□□ -2.31
RFC4P35249 7SK.10-201ENST00000621414 298 ntBASIC0.62□□□□□ -2.31
RFC4P35249 AC112487.2-201ENST00000637950 304 ntBASIC0.62□□□□□ -2.31
RFC4P35249 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
RFC4P35249 Y_RNA.70-201ENST00000362886 110 ntBASIC0.61□□□□□ -2.31
RFC4P35249 RNA5SP48-201ENST00000363969 126 ntBASIC0.61□□□□□ -2.31
RFC4P35249 Y_RNA.252-201ENST00000364556 101 ntBASIC0.61□□□□□ -2.31
RFC4P35249 Y_RNA.286-201ENST00000364813 102 ntBASIC0.61□□□□□ -2.31
RFC4P35249 Y_RNA.433-201ENST00000384089 102 ntBASIC0.61□□□□□ -2.31
RFC4P35249 Y_RNA.439-201ENST00000384119 94 ntBASIC0.61□□□□□ -2.31
RFC4P35249 Y_RNA.551-201ENST00000384661 102 ntBASIC0.61□□□□□ -2.31
RFC4P35249 RNU6-21P-201ENST00000384710 107 ntBASIC0.61□□□□□ -2.31
RFC4P35249 RNA5SP95-201ENST00000410319 137 ntBASIC0.61□□□□□ -2.31
RFC4P35249 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
RFC4P35249 AC006157.1-201ENST00000611750 366 ntBASIC0.61□□□□□ -2.31
RFC4P35249 MIR6516-201ENST00000630554 81 ntBASIC0.61□□□□□ -2.31
RFC4P35249 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
RFC4P35249 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.6□□□□□ -2.31
RFC4P35249 Y_RNA.315-201ENST00000365117 102 ntBASIC0.6□□□□□ -2.31
RFC4P35249 Y_RNA.471-201ENST00000384312 102 ntBASIC0.6□□□□□ -2.31
RFC4P35249 SNORD38C-201ENST00000384381 69 ntBASIC0.6□□□□□ -2.31
RFC4P35249 MIR802-201ENST00000390235 94 ntBASIC0.6□□□□□ -2.31
RFC4P35249 SNORD99-201ENST00000408612 74 ntBASIC0.6□□□□□ -2.31
RFC4P35249 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
RFC4P35249 AL392103.1-201ENST00000447000 198 ntBASIC0.6□□□□□ -2.31
RFC4P35249 U8.20-201ENST00000459445 131 ntBASIC0.6□□□□□ -2.31
RFC4P35249 SNORA40.14-201ENST00000516543 86 ntBASIC0.6□□□□□ -2.31
RFC4P35249 PART1_1.1-201ENST00000611761 217 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms