Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.09□□□□□ -2.07
SLC6A4P31645 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.08
SLC6A4P31645 Y_RNA.634-201ENST00000364811 113 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 snoU2-30.1-201ENST00000365012 70 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 RNU6-1130P-201ENST00000365434 107 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 SNORD50.2-201ENST00000365465 70 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 RNU6-597P-201ENST00000365620 102 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 HMGN2P32-201ENST00000444648 269 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A4P31645 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
SLC6A4P31645 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLC6A4P31645 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SLC6A4P31645 RNU6-1084P-201ENST00000362498 107 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 RNU6-774P-201ENST00000363238 107 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 SNORD14E-201ENST00000364009 85 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 Y_RNA.336-201ENST00000365307 109 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 Y_RNA.343-201ENST00000365354 112 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 RNU6-296P-201ENST00000384608 107 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 MIR613-201ENST00000385248 95 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.07□□□□□ -2.08
SLC6A4P31645 RNU6-504P-201ENST00000516568 104 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 RNU6-789P-201ENST00000517105 102 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.07□□□□□ -2.08
SLC6A4P31645 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.07□□□□□ -2.08
SLC6A4P31645 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
SLC6A4P31645 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.06□□□□□ -2.08
SLC6A4P31645 RNU6-199P-201ENST00000362954 107 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 RNU6-151P-201ENST00000364158 107 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 SNORA25.7-201ENST00000364375 127 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 RNU6-442P-201ENST00000383968 104 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 SNORA75.5-201ENST00000391291 81 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.06□□□□□ -2.08
SLC6A4P31645 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 RPL23AP63-201ENST00000498752 471 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 CYCTP-201ENST00000504253 315 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 SNORA31.10-201ENST00000516482 106 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 AC027279.3-201ENST00000625055 122 ntBASIC2.06□□□□□ -2.08
SLC6A4P31645 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.06□□□□□ -2.08
SLC6A4P31645 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SLC6A4P31645 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SLC6A4P31645 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 SNORD24-201ENST00000383884 75 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 Y_RNA.486-201ENST00000384398 107 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 Y_RNA.488-201ENST00000384403 102 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 RNU6-1031P-201ENST00000384773 107 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SLC6A4P31645 SNORD37.2-201ENST00000391075 66 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 AP000942.3-201ENST00000603702 160 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 MIR6844-201ENST00000637122 62 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.05□□□□□ -2.08
SLC6A4P31645 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SLC6A4P31645 Y_RNA.4-201ENST00000362333 112 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 Y_RNA.215-201ENST00000364204 112 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 RNU6-978P-201ENST00000364371 103 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 MIR513C-201ENST00000401352 84 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 RNA5SP100-201ENST00000410903 110 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 RNA5SP59-201ENST00000410922 110 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 AL158823.1-201ENST00000418441 478 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 HSPE1P9-201ENST00000440046 311 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 SNORD45.4-201ENST00000516629 73 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 MIR548X2-201ENST00000579776 100 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 AC120024.3-201ENST00000603167 156 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.04□□□□□ -2.08
SLC6A4P31645 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.04□□□□□ -2.08
SLC6A4P31645 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SLC6A4P31645 Y_RNA.91-201ENST00000363042 107 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 RNU6-768P-201ENST00000384683 107 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 SNORD72-201ENST00000390994 80 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 TMSB4XP3-201ENST00000445144 114 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
SLC6A4P31645 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SLC6A4P31645 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SLC6A4P31645 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SLC6A4P31645 Y_RNA.66-201ENST00000362862 102 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 SNORD50B-201ENST00000364995 70 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 RNU4-11P-201ENST00000365287 132 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 RNU6-187P-201ENST00000384139 106 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 U8.13-201ENST00000390842 128 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 RNU6-360P-201ENST00000390944 104 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 SNRPGP13-201ENST00000442212 177 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 RNU7-34P-201ENST00000459394 64 ntBASIC2.02□□□□□ -2.09
SLC6A4P31645 AC108729.3-201ENST00000513484 108 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms