Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RPL22P17-201ENST00000438729 315 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 AC069113.1-201ENST00000517763 267 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 AC005972.2-201ENST00000604690 348 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU6-434P-201ENST00000384376 107 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU2-29P-201ENST00000410423 189 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 ELOCP4-201ENST00000420090 333 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU6-551P-201ENST00000516661 103 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.57□□□□□ -2.66
CLIP1P30622 AC004223.4-201ENST00000612426 332 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU4-28P-201ENST00000364739 141 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 RNU6-325P-201ENST00000411132 105 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.58□□□□□ -2.66
CLIP1P30622 RNU7-55P-201ENST00000459426 62 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 MTCO2P29-201ENST00000465212 189 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 RPL30P10-201ENST00000488148 337 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 snoU83B.1-201ENST00000517136 88 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 MTATP6P15-201ENST00000527233 835 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 AL662814.1-201ENST00000617364 121 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 U6.114-201ENST00000636407 96 ntBASIC-1.58□□□□□ -2.66
CLIP1P30622 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.59□□□□□ -2.66
CLIP1P30622 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.59□□□□□ -2.66
CLIP1P30622 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.59□□□□□ -2.66
CLIP1P30622 MIR5704-201ENST00000584029 77 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 AC005828.6-201ENST00000606610 232 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 AC109347.2-201ENST00000610220 349 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 AL354950.2-201ENST00000617939 290 ntBASIC-1.59□□□□□ -2.66
CLIP1P30622 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 AL603914.1-201ENST00000401964 204 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 MTND2P18-201ENST00000419962 1030 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 Z82188.1-201ENST00000436709 154 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 AC079140.5-201ENST00000507882 310 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 AC105417.1-201ENST00000514691 285 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 TUSC7.1-201ENST00000610969 165 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 AC009248.2-201ENST00000619826 254 ntBASIC-1.6□□□□□ -2.67
CLIP1P30622 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 RNA5SP237-201ENST00000410414 113 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 AC074085.1-201ENST00000413598 418 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 MTND2P30-201ENST00000456663 382 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 AP003181.2-201ENST00000528941 181 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 MIR548AE1-201ENST00000583292 70 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 AL158050.2-201ENST00000605336 568 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 AC007671.2-201ENST00000637344 619 ntBASIC-1.61□□□□□ -2.67
CLIP1P30622 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.62□□□□□ -2.67
CLIP1P30622 RNU6-280P-201ENST00000364145 104 ntBASIC-1.62□□□□□ -2.67
CLIP1P30622 RNU6-809P-201ENST00000384461 107 ntBASIC-1.62□□□□□ -2.67
CLIP1P30622 RNU6-159P-201ENST00000391080 106 ntBASIC-1.62□□□□□ -2.67
CLIP1P30622 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.62□□□□□ -2.67
CLIP1P30622 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.62□□□□□ -2.67
CLIP1P30622 AC022616.4-201ENST00000522985 181 ntBASIC-1.62□□□□□ -2.67
CLIP1P30622 RNU1-141P-201ENST00000364623 158 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 SNORD24-201ENST00000383884 75 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 SNORA20.2-201ENST00000383922 131 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 RNA5SP461-201ENST00000516451 104 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 RNU6-531P-201ENST00000516694 104 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 AC064836.2-201ENST00000609491 462 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 AC016911.1-201ENST00000613297 452 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 AC006386.1-201ENST00000619436 415 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.63□□□□□ -2.67
CLIP1P30622 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.64□□□□□ -2.67
CLIP1P30622 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.64□□□□□ -2.67
CLIP1P30622 RNU6-154P-201ENST00000384306 106 ntBASIC-1.64□□□□□ -2.67
CLIP1P30622 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.64□□□□□ -2.67
CLIP1P30622 MTND4LP18-201ENST00000526864 291 ntBASIC-1.64□□□□□ -2.67
CLIP1P30622 MTCO3P23-201ENST00000561363 289 ntBASIC-1.64□□□□□ -2.67
CLIP1P30622 YWHAEP2-201ENST00000580066 112 ntBASIC-1.64□□□□□ -2.67
CLIP1P30622 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 RNU6-597P-201ENST00000365620 102 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 RNU6-767P-201ENST00000384132 107 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 RNU6-541P-201ENST00000384709 110 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 AL031667.1-201ENST00000440222 725 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 MTCO1P29-201ENST00000496868 288 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 RNU6-966P-201ENST00000516479 104 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.65□□□□□ -2.67
CLIP1P30622 MIR8068-201ENST00000618032 68 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 AC091931.1-201ENST00000623488 728 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 AC006927.2-201ENST00000639256 389 ntBASIC-1.65□□□□□ -2.67
CLIP1P30622 SNORD115-34-201ENST00000362441 82 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-12-201ENST00000362583 82 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-29-201ENST00000362834 82 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-9-201ENST00000362912 82 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-21-201ENST00000362963 81 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-14-201ENST00000363090 81 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-13-201ENST00000363358 82 ntBASIC-1.66□□□□□ -2.67
CLIP1P30622 SNORD115-11-201ENST00000363616 82 ntBASIC-1.66□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms