Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNA5SP118-201ENST00000410385 109 ntBASIC-0.22□□□□□ -2.44
COL4A5P29400 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.22□□□□□ -2.44
COL4A5P29400 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL4A5P29400 RNU7-67P-201ENST00000459003 62 ntBASIC-0.22□□□□□ -2.44
COL4A5P29400 RNU6-408P-201ENST00000515910 100 ntBASIC-0.22□□□□□ -2.44
COL4A5P29400 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL4A5P29400 MIR5188-201ENST00000583467 113 ntBASIC-0.22□□□□□ -2.44
COL4A5P29400 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.23□□□□□ -2.45
COL4A5P29400 AC069271.1-201ENST00000445577 156 ntBASIC-0.23□□□□□ -2.45
COL4A5P29400 MTND1P17-201ENST00000448961 204 ntBASIC-0.23□□□□□ -2.45
COL4A5P29400 AC023449.1-201ENST00000454464 154 ntBASIC-0.23□□□□□ -2.45
COL4A5P29400 RNU7-185P-201ENST00000459215 60 ntBASIC-0.23□□□□□ -2.45
COL4A5P29400 SNORA40.9-201ENST00000515895 93 ntBASIC-0.23□□□□□ -2.45
COL4A5P29400 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
COL4A5P29400 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU6-522P-201ENST00000364497 107 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU6-767P-201ENST00000384132 107 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 MIR518F-201ENST00000384973 87 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 MIR514A2-201ENST00000385131 88 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 MIR514A3-201ENST00000385132 88 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 MIR802-201ENST00000390235 94 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 AL512326.2-201ENST00000426359 151 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU7-62P-201ENST00000458856 62 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU6-956P-201ENST00000458868 103 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.24□□□□□ -2.45
COL4A5P29400 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU6-566P-201ENST00000516790 107 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU6-958P-201ENST00000516995 106 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU2-12P-201ENST00000517216 168 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 IGKV1-22-201ENST00000524313 326 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 AL512360.1-201ENST00000555346 234 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 AC005899.2-201ENST00000584353 90 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 MIR6755-201ENST00000619993 66 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 RNU6-268P-201ENST00000364174 107 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
COL4A5P29400 SNORD12B-201ENST00000410433 91 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL4A5P29400 AC006441.5-201ENST00000612680 209 ntBASIC-0.24□□□□□ -2.45
COL4A5P29400 SNORD114-5-201ENST00000362928 70 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 SNORD45.3-201ENST00000363836 72 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 RNA5SP128-201ENST00000365305 116 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 MIR106A-201ENST00000384870 81 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 RNU6-373P-201ENST00000411247 98 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 RNU4-63P-201ENST00000411313 118 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 MTCO2P27-201ENST00000420740 428 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 AC236972.2-201ENST00000434979 310 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 MTND2P22-201ENST00000444325 1033 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 RNU7-159P-201ENST00000459284 62 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 RNU6-436P-201ENST00000516171 114 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 AC105029.1-201ENST00000520250 669 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 AC007751.1-201ENST00000529260 376 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 MIR8055-201ENST00000610739 97 ntBASIC-0.25□□□□□ -2.45
COL4A5P29400 AL031003.1-201ENST00000404229 172 ntBASIC-0.26□□□□□ -2.45
COL4A5P29400 RNU2-13P-201ENST00000515909 113 ntBASIC-0.26□□□□□ -2.45
COL4A5P29400 MTND1P24-201ENST00000552175 861 ntBASIC-0.26□□□□□ -2.45
COL4A5P29400 AC008608.1-201ENST00000603910 127 ntBASIC-0.26□□□□□ -2.45
COL4A5P29400 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-929P-201ENST00000384429 107 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 USP9YP30-201ENST00000430729 455 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 RPL39P25-201ENST00000449384 154 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 snoU13.2-201ENST00000459201 104 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-470P-201ENST00000515954 104 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 AC138869.1-201ENST00000568623 124 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 AC087685.1-201ENST00000587507 141 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 AC121247.2-201ENST00000604776 136 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 AC073114.1-201ENST00000612027 490 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 MIR8064-201ENST00000612863 90 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 MIR6128-201ENST00000615528 109 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 SNORD115-30-201ENST00000364117 82 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 POLR2KP2-201ENST00000438155 177 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-135P-201ENST00000516769 101 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 RNU6-782P-201ENST00000516852 104 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 uc_338.36-201ENST00000622331 158 ntBASIC-0.27□□□□□ -2.45
COL4A5P29400 SNORA36.1-201ENST00000363424 132 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 RNU6-483P-201ENST00000384088 108 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 SNORA75-201ENST00000384158 137 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 MIR1207-201ENST00000408249 87 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 AC015818.7-201ENST00000428754 109 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 AC087499.7-201ENST00000441958 109 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 FCF1P4-201ENST00000448326 183 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL4A5P29400 AC125232.2-201ENST00000592457 143 ntBASIC-0.28□□□□□ -2.45
COL4A5P29400 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL4A5P29400 RNU6-626P-201ENST00000363354 107 ntBASIC-0.29□□□□□ -2.46
COL4A5P29400 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms