Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC027419.1-201ENST00000522976 328 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AC024995.1-201ENST00000523014 93 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AL160236.1-201ENST00000556317 195 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AC055872.1-201ENST00000570978 278 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 MIR5094-201ENST00000578766 85 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 MIR3128-201ENST00000581957 66 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AL008718.3-201ENST00000610217 321 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AL359075.3-201ENST00000613288 217 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.85□□□□□ -2.27
COL5A1P20908 AC245060.5-201ENST00000610778 3293 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 Y_RNA.54-201ENST00000362766 105 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 RNU6-1266P-201ENST00000362794 105 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 Y_RNA.172-201ENST00000363765 102 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 Y_RNA.307-201ENST00000365022 117 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 SNORA72.4-201ENST00000384174 132 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 Y_RNA.461-201ENST00000384263 103 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
COL5A1P20908 MIR891A-201ENST00000401237 79 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 RNU2-14P-201ENST00000411053 191 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AC099677.2-201ENST00000436385 175 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AL049830.1-201ENST00000468034 425 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 RPL23AP54-201ENST00000495129 419 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 MTND1P19-201ENST00000511780 315 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AC136628.3-201ENST00000521868 290 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 RPL21P9-201ENST00000556149 474 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AC012433.1-201ENST00000588916 398 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AL162424.1-201ENST00000602325 221 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 AC022202.1-201ENST00000613515 211 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 U6.108-201ENST00000637764 58 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 U6.104-201ENST00000637979 90 ntBASIC0.85□□□□□ -2.27
COL5A1P20908 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.27
COL5A1P20908 Y_RNA.124-201ENST00000363339 93 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 Y_RNA.144-201ENST00000363521 113 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 RNU6-740P-201ENST00000364734 105 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 RNU6-144P-201ENST00000383951 107 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 MIR518A2-201ENST00000384966 87 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 AC245047.3-201ENST00000429428 127 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 Z98949.2-201ENST00000440996 144 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.84□□□□□ -2.28
COL5A1P20908 AC010598.1-201ENST00000510378 103 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 RNU6-1023P-201ENST00000516137 106 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 RNU6-1041P-201ENST00000516254 102 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 RNU7-99P-201ENST00000516271 62 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 SNORA31.17-201ENST00000516953 127 ntBASIC0.84□□□□□ -2.28
COL5A1P20908 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.84□□□□□ -2.28
COL5A1P20908 Y_RNA.20-201ENST00000362479 113 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 RNU4-80P-201ENST00000363200 141 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 RNU6-1164P-201ENST00000364428 107 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 Y_RNA.274-201ENST00000364714 101 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 MIR515-2-201ENST00000384883 83 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 MIR515-1-201ENST00000384884 83 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 AL117342.1-201ENST00000404861 406 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 Y_RNA.590-201ENST00000410140 107 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 AC008134.1-201ENST00000420943 193 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 AC108059.2-201ENST00000434626 151 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 RNU7-172P-201ENST00000517125 64 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 RNU6-794P-201ENST00000517261 64 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.83□□□□□ -2.28
COL5A1P20908 MIR8054-201ENST00000620877 86 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 MIR6086-201ENST00000638065 55 ntBASIC0.83□□□□□ -2.28
COL5A1P20908 RNU6-1084P-201ENST00000362498 107 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 Y_RNA.288-201ENST00000364854 92 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU6-326P-201ENST00000365480 107 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU4-70P-201ENST00000384579 139 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 SNORA26.5-201ENST00000391215 123 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 AL603910.2-201ENST00000407268 136 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNA5SP193-201ENST00000410353 107 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNA5SP511-201ENST00000410487 115 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RPL30P13-201ENST00000418873 348 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 snoU13.27-201ENST00000459278 104 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU6-1291P-201ENST00000516591 104 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU7-116P-201ENST00000516940 62 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 MIR4423-201ENST00000580922 80 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 MIR4282-201ENST00000583613 67 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.82□□□□□ -2.28
COL5A1P20908 Pinc.1-201ENST00000616452 154 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 Y_RNA.60-201ENST00000362831 98 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU6-899P-201ENST00000363947 107 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 Y_RNA.286-201ENST00000364813 102 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU4-17P-201ENST00000365598 141 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 VTRNA1-3-201ENST00000365645 89 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 SNORA8.3-201ENST00000384679 139 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU6-763P-201ENST00000390865 106 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNA5SP323-201ENST00000391094 133 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 MIR1298-201ENST00000408783 112 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 AL162725.1-201ENST00000435405 301 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 HSPE1P21-201ENST00000438283 308 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU6-437P-201ENST00000459408 95 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.82□□□□□ -2.28
COL5A1P20908 OR2A41P-201ENST00000473586 105 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 RNU6-453P-201ENST00000516819 85 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 MIR4724-201ENST00000579485 89 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 MIR5688-201ENST00000580619 83 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 AC022217.4-201ENST00000604389 163 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 JPX_2.1-201ENST00000614161 69 ntBASIC0.82□□□□□ -2.28
COL5A1P20908 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.82□□□□□ -2.28
COL5A1P20908 AC100821.1-201ENST00000523153 2479 ntBASIC0.81□□□□□ -2.28
COL5A1P20908 Y_RNA.76-201ENST00000362931 109 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms