Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR598-201ENST00000384868 97 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 AC098614.3-201ENST00000438957 440 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 SNORD116.3-201ENST00000517176 78 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 RNU7-181P-201ENST00000517234 74 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 MIR4272-201ENST00000635924 64 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.537-201ENST00000384626 109 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 RNY4P36-201ENST00000391116 96 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 MTCO2P33-201ENST00000402100 465 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 RNU6-1007P-201ENST00000516586 107 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 MIR548AO-201ENST00000579992 96 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 AC008507.4-201ENST00000585464 127 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 AL080274.1-201ENST00000605565 220 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 AC015726.2-201ENST00000620112 122 ntBASIC0.52□□□□□ -2.33
HLA-DPA1P20036 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 SNORA1.2-201ENST00000365189 134 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.376-201ENST00000365638 108 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 SCARNA8-201ENST00000515924 131 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 MIR3145-201ENST00000580727 82 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 AL512605.2-201ENST00000592972 256 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 MIR4791-201ENST00000607666 84 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 MIR7111-201ENST00000619751 72 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.51□□□□□ -2.33
HLA-DPA1P20036 MTND1P7-201ENST00000632801 297 ntBASIC0.51□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.384-201ENST00000383909 102 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 SNORD116-29-201ENST00000384516 83 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 RNU6-437P-201ENST00000459408 95 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 RPL23AP91-201ENST00000569211 455 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 RPS29P30-201ENST00000600975 111 ntBASIC0.5□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.242-201ENST00000364473 110 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.458-201ENST00000384240 102 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.463-201ENST00000384271 102 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 MIR1278-201ENST00000408753 81 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 SNORA36B-201ENST00000410438 131 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.619-201ENST00000410951 90 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.718-201ENST00000517110 102 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.49□□□□□ -2.33
HLA-DPA1P20036 RNU6-21P-201ENST00000384710 107 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 MT-TN-201ENST00000387400 73 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 SNORD72-201ENST00000390994 80 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 RNU6-847P-201ENST00000411115 108 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 AP000753.3-201ENST00000604083 169 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 AL121655.1-201ENST00000605811 308 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 AC006441.5-201ENST00000612680 209 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 AC084781.2-201ENST00000615568 161 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
HLA-DPA1P20036 PVT1_3.1-201ENST00000620853 95 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.142-201ENST00000363491 102 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 Y_RNA.551-201ENST00000384661 102 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 RNU4-30P-201ENST00000410245 143 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 RNU7-141P-201ENST00000459304 62 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 RNU6-277P-201ENST00000516272 106 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 SNORA20.3-201ENST00000516880 132 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.47□□□□□ -2.33
HLA-DPA1P20036 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
HLA-DPA1P20036 MIR377-201ENST00000362145 69 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 Y_RNA.39-201ENST00000362620 98 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-674P-201ENST00000363831 107 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-934P-201ENST00000365154 107 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-580P-201ENST00000365159 107 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 MIR573-201ENST00000384964 99 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-205P-201ENST00000390858 107 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 MIR936-201ENST00000401264 98 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AL603910.2-201ENST00000407268 136 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AC138393.2-201ENST00000414742 246 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-977P-201ENST00000516411 103 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AC092447.9-201ENST00000603395 144 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AL138825.1-201ENST00000618587 192 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 AC243994.1-201ENST00000618627 109 ntBASIC0.46□□□□□ -2.34
HLA-DPA1P20036 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HLA-DPA1P20036 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 RNU6-1048P-201ENST00000364054 107 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 Y_RNA.439-201ENST00000384119 94 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 SNORD63-201ENST00000384262 68 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 RNU6-937P-201ENST00000384325 106 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 MIR520F-201ENST00000384824 87 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 MIR520H-201ENST00000385126 88 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.45□□□□□ -2.34
HLA-DPA1P20036 snoU13.21-201ENST00000459368 105 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 Y_RNA.661-201ENST00000516003 99 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 MIR1302-1-201ENST00000637932 143 ntBASIC0.45□□□□□ -2.34
HLA-DPA1P20036 SNORD45.3-201ENST00000363836 72 ntBASIC0.44□□□□□ -2.34
HLA-DPA1P20036 Y_RNA.187-201ENST00000363918 113 ntBASIC0.44□□□□□ -2.34
HLA-DPA1P20036 SNORD83.1-201ENST00000411362 77 ntBASIC0.44□□□□□ -2.34
HLA-DPA1P20036 MTND1P14-201ENST00000427400 950 ntBASIC0.44□□□□□ -2.34
HLA-DPA1P20036 AL160004.2-201ENST00000432935 350 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms